Carassius gibelio (silver crucian carp): 128020892
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Entry
128020892 CDS
T08819
Name
(RefSeq) PDZ and LIM domain protein 5b isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128020892
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
128020892
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
128020892
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
zf-C3HC4_3
DUF3854
Motif
Other DBs
NCBI-GeneID:
128020892
NCBI-ProteinID:
XP_052463645
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Position
A10:4495135..4567507
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AA seq
606 aa
AA seq
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MSNFSVSLTGPSPWGFRLQGGKDFSMPLTISKLTEGGKAAKAKISVGDVVLSIDGIATEG
MTHLEAQNKIKACTGNLNLSLLRSSSATKTDTPKEEPLEIIKPVPISTPASLAPGSSAYN
KTARPFGGTPSTVRSVSPSPAAPKASIPSIPSASSAFTPAAPSQQPPQPPFPLGASRAVS
SPCSAPKPASGHSPFANSSSTSSSGSSSPARVLAPPPAPAAPLPSVYNTPINLYSNENAC
EVAMGQRRGLLESRAPGEQHNGTARKPVLEPEGNHVSAPSDSSKKRLMEDTEDWHPRTGT
SQSRTFRILAQITGTENEQAQENRPGKSEASEELQPSSHATSSVKTMSKASAGAPRQGNG
VPPASAKSSAAGFPKAGAPAPQTGPSFGRVSNSLPKGPDRPAPQPHPSDQDDSLVQRAEH
IPAGKRTPMCGHCNMVIRGPFLVAMGKSWHKEEFTCSHCRSSLADVGFVEERGSVYCERC
YEQFLAPACFKCQQKILGEVINALKQTWHVHCFLCTGCQKPIRNNTFHLEDGQPYCETDY
YTLFGTSCHGCDFPIEAGDKFLEALGFTWHDTCFVCTVCSTSLEGQTFFSKKDKPLCKKH
AHSVQF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactttagcgtgtccttgactggaccttccccctggggcttcagactacagggt
ggcaaggacttcagcatgcctctcaccatctccaaactgacagaaggaggaaaggcagcc
aaagccaagatcagcgtcggggacgtcgtgctgtctatcgacggcatcgccacggaggga
atgacacacctggaagcacagaataaaatcaaagcctgtacgggaaacctgaacctctcg
ctgctgagatcttccagtgccactaaaacggacacccccaaggaggaacccctggagatc
ataaagcccgtgcccatcagcacccccgccagcctcgccccgggcagcagtgcatacaat
aagacggcacgacccttcggcgggacccctagcaccgtcagatcagtcagtccgtcccca
gccgcccccaaagcatccatcccctccatcccctccgcctcctctgcgttcaccccagct
gctccgtcccagcagcctcctcagcctcccttcccactgggagccagccgtgctgtgtcc
tctccatgctccgcccccaaacctgcctctggacactccccctttgctaactcctcctcc
acgtcctcctctggctcctcctcgccggcgagagtgctggctccgccccctgctcccgcg
gctcctcttccgtccgtctataacacgcccatcaacctctactccaatgagaacgcgtgt
gaggtggccatgggccagagacgcggcctgctggagagcagagcccctggggaacagcac
aacgggaccgcccgtaagcccgtgctggagccggaggggaaccacgtctctgctccgagt
gactccagtaagaagcgtctgatggaggacacggaggactggcacccgcgcaccggcacg
tctcagtcacgcaccttccgcatcctggcgcagatcaccggcacggagaacgaacaagct
caggagaaccggccggggaagagcgaggcttcagaggagcttcagcccagttctcatgcc
acgtcttcagtcaaaaccatgagtaaagcgtccgctggagccccgcggcagggcaacggt
gtccctccagcttcagccaagagcagcgccgcagggtttcccaaagcaggtgcacctgcg
ccacagacgggcccctcgttcggacgggtcagcaacagccttcccaagggcccggatcga
cccgcgcctcagcctcaccccagtgaccaggacgattctctggtgcagagagccgagcac
atcccggcggggaaacgcacacctatgtgtggccactgcaacatggtcatcaggggtccg
ttcctggtggccatgggtaaatcctggcacaaggaggagttcacctgctctcactgccgc
agttctctggcagacgtgggcttcgtggaggagcgtggctctgtgtactgcgagcgctgc
tacgagcagtttctggccccggcctgcttcaagtgccagcagaagattctgggggaagtc
atcaatgccctgaagcaaacctggcatgtgcactgcttcctgtgcaccggctgccagaag
cccatccgaaacaacacctttcacctggaggacggccagccgtactgtgagaccgattac
tacaccctgttcggcaccagctgtcacggctgtgacttccccatcgaagcgggcgataag
ttcctggaggcgctgggcttcacctggcacgacacctgcttcgtctgcacggtgtgcagc
acgagtctggagggtcagaccttcttctccaagaaagacaagcccttgtgcaagaagcac
gctcacagcgtccagttctga
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