Carassius gibelio (silver crucian carp): 128025272
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Entry
128025272 CDS
T08819
Name
(RefSeq) metastasis-associated protein MTA3-like isoform X1
KO
K11660
metastasis-associated protein MTA
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128025272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
128025272
03036 Chromosome and associated proteins [BR:
cgib03036
]
128025272
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
128025272
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
128025272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
VASt
Motif
Other DBs
NCBI-GeneID:
128025272
NCBI-ProteinID:
XP_052467425
LinkDB
All DBs
Position
A12:15576839..15604246
Genome browser
AA seq
726 aa
AA seq
DB search
MPMFFFVIICFIFWHVSISYCSSFGMQDYVFFENSSSNPYLIRRIEELNKTASGNVEAKV
VCFYRRRDISQSLIQLADKHAKDLEEEKESPAEPEHTEKQKHQLRHRELFLSRQYESLPA
THIRGKCSVALLNETEAVLSYLDKEDTFFYSLVYDPTQKTLLADKGEIRVGPRFQADVPE
MLQEGEPDERDQSKLEMKIWDPDCPLTNKQIDQFLVVARAVGTFARALDCSSSVRQPSLH
MSAAAASRDITLFHAMDTLHRHGYDLSSALSVLVPQGGPVLCRDEMEEWSSSEANLFEEA
LEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKASEAESKLKQVYIPTY
NKPNPNQISVSNGKMATVNGAAGTGSFHTAGGGRACESCFAVQSAQWYSWGPPNMQCRLC
VSCWMYWKKYGGLKMPSRAEGAEEKTPPSPAPNEVRSRGHGARQSSHMVPIRNSGSPKSS
TKTKQAFLLQATRLTKLARHMCRDLIRLRRAARRPFVPINCGAIKAEYMIRVSEGMTGRP
MKPKSSPRSTLTSILQYLETRPPTHVQRPHRTPGLQVQPPRRLLSSLPSHGPHGMLGKRS
YHHHSRVESAERRASAPGLENPAHIAGPILQHNGSGTGASNLRGSGLMLRKRRPNWIDAP
DDSFFLVSRETRKARRLLSRSQLRRACRQPCEQISLRRVPQGPAQVPVLAPPHPSLRMRG
PIVIHD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgtttttctttgtgatcatttgtttcattttttggcacgtatccattagttac
tgctcctcattcggcatgcaagattatgtcttctttgagaattcttcaagcaacccttat
ctgatcaggcgaatagaggagctgaataagactgcaagtggcaatgtggaggcaaaggtg
gtctgtttctacaggagaagggacatctcgcagagcctcatccagctggctgacaaacac
gcaaaggacctggaagaagagaaggaaagccccgcagagcccgaacacactgaaaaacag
aaacatcaactccgccacagagagcttttcctttcccgccagtacgaatccctccccgcc
acacacatcagggggaagtgcagtgtggccctcctgaatgagaccgaagccgtgctctcc
tacctggataaagaggacacattcttttactcattggtgtacgaccccacacagaagaca
ctattggctgacaagggggagattcgtgttggtccacgatttcaggctgatgtccctgaa
atgctacaggaaggagaacctgatgaaagagaccagtccaaactggagatgaagatttgg
gacccagattgtccgctgaccaacaaacagattgaccagtttcttgtggttgctcgagcg
gttggtacttttgctcgagcgttggactgcagcagctccgtcagacagcccagcttacac
atgagtgccgcggcagcctcacgagacatcacactgtttcatgccatggacactctgcac
cggcacggctatgacctctccagtgctcttagtgtgctcgttcctcaaggagggccagtg
ctgtgccgggatgagatggaggaatggagctcgtcagaggcaaacttgtttgaggaggca
ctggagaagtacggcaaagacttcaatgatatccggcaagattttcttccttggaagtcg
ctgaccagcatcattgagtattattacatgtggaaaaccacagacagatatgttcagcag
aaacgactgaaggcatctgaagcagagagcaaactgaagcaagtctacatccctacatac
aacaaacccaatcctaaccagatctccgtcagtaatggcaaaatggcaactgtgaacggt
gcagcgggcacaggcagtttccacacagccggaggcggtcgtgcatgcgagagctgcttt
gccgtacagtctgctcagtggtactcgtggggtcctcctaacatgcagtgtcgcctatgt
gtgtcctgctggatgtattggaaaaagtatggtggcctgaagatgccaagcagagctgag
ggggcagaggaaaaaacgccgccaagccctgcacccaatgaggtgcgttctcgtggccat
ggcgcccgtcagtcttcccacatggttccgataaggaacagcggcagtcccaaatcgtcc
actaagactaagcaggcgttcctcttgcaggccacacgcctcaccaagctggcgcgtcac
atgtgccgcgatctcatcagactgcgccgggccgcgcgccgcccatttgtgcccattaac
tgtggtgccataaaggcggagtatatgatccgggtgtcagagggcatgacagggcgacct
atgaagcccaaatcttccccgaggagcaccctgaccagcatcttgcagtatcttgagact
cgtccgccaacccatgttcaacggccacatcgcacccctggcctacaggtgcagccccca
cgacgcctactttcatctcttcccagtcatggcccacatggcatgttgggaaaacggagc
tatcatcaccacagcagggttgaatctgcagaaaggagagccagtgctccaggactagaa
aatccagcccatattgcgggacccattctgcagcataatggaagcggcactggtgcctcc
aacctccgtggcagtggcctgatgctccgcaagagacgacctaactggatcgatgctccc
gatgacagcttcttcctggtttcccgagagacgaggaaagccagaaggctgctctcccgt
tcacagttacgaagagcgtgtagacagccatgtgagcagatcagcctgcgcagggtcccc
caggggccagcgcaggtgcctgtcctggcgccccctcaccccagtttacggatgcgaggc
ccaatcgtcatccatgactga
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