KEGG   Carassius gibelio (silver crucian carp): 128028831
Entry
128028831         CDS       T08819                                 
Name
(RefSeq) collagen alpha-4(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    128028831
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    128028831
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    128028831
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    128028831
   00536 Glycosaminoglycan binding proteins [BR:cgib00536]
    128028831
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   128028831
Glycosaminoglycan binding proteins [BR:cgib00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   128028831
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 128028831
NCBI-ProteinID: XP_052472121
LinkDB
Position
A15:complement(4095567..4121478)
AA seq 1615 aa
MSRPHRNASTSHLFFRRLLFALMTIHTALGGDKTERCDGRDCSVCQCFPHKGERGNPGVL
GQQGPQGPRGLPGPRGLNGEKGRSGPVGLPGVSGPKGDQGFQGEKGHAALDGVPGHPGPG
GPPGFPGKDGCNGARGKLGLNGEIGRPGLPGAKGLPGLKGAKGDTSTSLTFIPGTPGDDG
LSGISGPHGDPGRLLPGPKGDEGDHGPQGEPGPFEYVEPNPEDCVKGDKGKKGPRGICGV
PGPEGCEGPPGEEGQKGIIGLSGPRGPCGDIGLPGLCGIQGPKGCSGDPGPKGNPECYYN
HVIGPPGDRGLPCAAGLPGDRGMPGIPGPPGDSGACITGPEGECGLPGLNGLKGEKGDPG
NLCGSLLNGEPGKPGCPGPKGQCGNPGNSGYYCLTGERGETGQGGYRGPPGLKGVQGRKG
PDGGCACDPLGDLPGDPGPPGPPGVPGCPGKTGCQGPPGDVGPTGKMGLRGVAGPRGFIG
VRGAKGEKGDVMMMCRKGDKGDEGSVGSCGKPGCSGREGADGKIGAPGDPGPMGDCIVGP
PGDRGCPGAAGVRGVRGPAGLPGPNMMGSVGRRGQQGCQGPQGQTGPPGPKGVQGDTLPC
GPGIRGAPGCKGMPGCKGEKGKLGNPGCIGQNGPCGPKGEIGDPGDCRVTGLTGPVGCSG
DPGDTGPDGQSVCGSPGTPGNRGCQGLKGCSGDCITGAPGPKGPSGIQGCQGPKGVPGPT
GPNGLQGACGVPGFPGRKGENGIDGTPGAPGCPGGRPEHCDKGQAGPPGNTGPPGFTGPR
GCPGEKGSPGEPGSSCIGAKGQCGMLGTPGNQGCAGLQGPPGFEGDCGNPGCPGPKGLPG
CPGQDGCPGNKGRTGPLGPPGPKGIRGFSGYPGCPGVNGTKGQKGCIGPPGPLGDITPVL
LKGQVGPPGPGGENGFCGERGNKGDPGPPGQPGCAGRNGPPGSECGQCGPAGIPGLCGVP
GARGQRGPKGIVGFPGDNGDQGDPGSCGLPGTPGFPGFDGPKGDKGESICEPGLIGEIGP
CGDRGVSAPPGGEGDCGDPGPQGPRGCSGPPGPPGNNGLTGPPGVVGPPGPCGRHGPEGP
PGCPGPPGPKGNPGRIGLRGPPGPPGLHGLDGLEGYNGEKGCRGQGINGCRGNKGLTGDK
GTPGDPGLRGPSQTGVRGPNGKCGCQGDPGPMGPPGCRGPECKTPKHGPCGERGCAGPDG
PPGPKGEQGEAGCVFTVNGDCGDPGCKGDPGCKGERGSCGLSGLPGCEGLKGPKGERGQC
GLMGLPGLPGTRGDCGPRGLCGPKGDIGDPGLKGDPGTVIIPPTPCPLLPGPPGAPGAPG
PVGEAGEHGPNGTEGPNGIKGQKGDSGISGPTGPEGPQGLSGNPGEIGEKGAKGSQGPQG
SVGDEGPPGPSSSGFLLVIHSQSEIVPTCPSGLAELWNGYSLLYLEAQERAHIQDLGQAG
SCLRMFSTLPFSCCNMNGCDYASRNDKSYWLSTNASIPSNSTLRGMEIQPHISRCVVCEV
SSPAITLHSQDGNTPECPFNWRTLWVGYSFLMHTGSGDEGGGPSLASTGSCLQEFHSQPF
VECQGPLGTCQYSPTFYSFWLTRVNMEPFNSVPYSTVLTEENQLDSISTCSVCVT
NT seq 4848 nt   +upstreamnt  +downstreamnt
atgtcacgtccccaccggaatgcctccaccagccaccttttcttcaggaggcttttattt
gcacttatgaccatacacacagcattggggggagacaagacagaaaggtgcgacggtcga
gactgcagcgtctgccagtgtttcccccacaaaggagagagggggaatcctggtgtgtta
ggtcagcagggcccacaggggcctcggggtttgcctggcccccgaggacttaatggtgaa
aagggtcgaagtggacccgtaggattgcctggggtctccggcccgaaaggagaccaggga
tttcaaggagaaaaaggccatgctgcattagatggagtgcctggtcatccagggcctggt
ggtcctcctgggtttccagggaaggatggctgtaacggagccagagggaaattagggttg
aatggtgagataggacgacccgggctcccaggagccaagggactacctgggttaaaagga
gccaaaggagacacgtctacaagtttaactttcattcctggtacacctggtgatgatgga
ctttctggaatctctggaccacacggagacccaggaaggttactaccaggaccgaaagga
gatgagggcgaccacggtcctcagggtgaaccaggtccatttgaatatgtggagcctaac
ccagaagactgtgtaaaaggcgataaggggaaaaagggaccgagaggaatttgtggggta
cctgggccagagggttgtgaagggccgccgggagaagaaggacagaaaggcataattggg
ctctctggtcccagaggtccatgtggggatattggtcttcctggtctatgtggcatccaa
gggccaaagggctgctcaggtgaccccggacctaaaggaaacccagagtgctattacaac
catgtgataggaccacctggagatcgtgggcttccttgtgcagcgggacttcctggggat
agagggatgccgggtatacctggaccccctggtgattcaggagcatgtataacaggtcca
gagggtgaatgtggtctgccaggtcttaatggactgaaaggagaaaaaggtgacccagga
aacctatgcgggtcactcttaaatggggaacctggaaaaccgggctgccctggacccaaa
ggacaatgtggaaatcctgggaattctggttactactgcctgactggtgaacgtggagaa
actggacagggtggatatagagggcctcctggattaaaaggtgttcagggaagaaaaggt
cctgatgggggatgtgcatgtgacccacttggtgatttaccaggagatccgggccctcca
gggcctcctggtgtccctggttgtcctgggaaaacaggctgtcagggtcctcctggcgat
gttggacccactggaaagatgggtttgagaggtgtagctggtcccagaggcttcataggt
gtcagaggggctaaaggagagaaaggagatgtgatgatgatgtgcagaaagggggataaa
ggtgatgaaggatctgttggatcatgtggaaaaccaggatgtagtgggagggaaggagct
gatgggaagattggtgcccctggagatcctggacctatgggagattgtattgttggtcca
ccgggtgacagggggtgtccaggggctgctggtgtgaggggtgtaagaggtccagctggt
cttcctggcccgaatatgatggggtcagttgggcgacgggggcaacaagggtgccaagga
cctcaaggccagacgggacctcctggtcctaaaggcgttcaaggtgatacactgccctgt
ggacctggcatacgtggagcccctggttgcaaagggatgcctggttgtaaaggtgagaaa
ggtaagcttggaaatccaggatgcatcggacagaatggaccatgtggtcccaagggagag
attggagaccctggtgactgtagggtaacaggtcttacaggtccagttggatgttcagga
gatcctggtgacactggcccagatggccagagtgtttgtggctctcctggcacacctggc
aatcgtggatgccagggtctgaaagggtgttctggcgactgtattacaggggctccagga
ccgaaagggccctctggaattcagggatgtcagggccctaaaggtgtccctggacctact
ggaccaaatggattgcaaggtgcatgtggagttcctggttttcctggtagaaaaggggaa
aacggaatagatggtacaccaggagcccctggttgcccaggtgggagaccagagcactgt
gacaaaggacaagctggtccacctggtaatacaggaccaccaggcttcactggaccaaga
gggtgccctggagagaaaggatcgcccggggagccaggatcttcatgcattggagccaaa
ggacaatgtggtatgcttggtaccccgggcaatcaaggatgtgcaggccttcagggacct
ccaggattcgaaggggactgtggaaaccctggatgccctggaccaaagggtttgcctgga
tgtcctggtcaagatggctgtcctggtaacaaagggaggactggccctttagggcctcct
ggaccgaaaggcatcaggggtttcagtggatatccaggttgcccaggggtaaacggaacc
aagggccagaaaggatgcattggacctccaggacctctgggagacataactccagtgcta
ttgaaaggccaggtagggccacctggacctggtggagagaatggtttctgtggagaaagg
ggtaataagggggacccaggtccacctggacaacctgggtgtgcgggacgtaatggacct
cctgggtctgaatgtggccagtgtggaccggcaggcattcctgggctgtgcggtgtgcct
ggtgcacgtgggcagcgtgggccaaagggaattgtgggatttccaggtgataatggtgat
cagggtgatcctggatcgtgtggtctgccaggaacccctggtttccctgggtttgatggt
cctaaaggtgacaaaggtgaatctatttgtgagccaggactaataggtgagatagggcca
tgtggagacagaggcgtgtcagctcctcctggtggtgaaggagactgcggtgaccctggc
ccacaagggcctaggggatgctctggtccacctggaccacctggaaacaatggcctgact
ggacctccaggagtcgttgggcccccaggtccttgtggaagacatggtccagaaggtccc
cctggatgtccaggtcccccgggccctaagggaaacccaggaaggattggccttagagga
cctccggggcccccaggactccatggactggacggcctggaggggtacaacggtgaaaag
gggtgtcgaggacagggtataaacggttgtaggggcaataaagggctgaccggagacaag
ggcactccaggagacccagggttgcgaggcccatcacaaacaggtgttcgaggtcccaat
ggaaagtgtgggtgccaaggagaccctggtccaatgggtcctccaggctgtcgtggtcca
gaatgtaagactcctaaacatggaccttgtggagaacggggttgtgctgggccagatgga
cctccagggcccaagggagagcaaggagaggcaggctgtgtgttcacagtgaacggggat
tgtggtgacccaggttgtaaaggagacccagggtgtaaaggagaaagaggatcgtgtggg
ctcagtggcctcccagggtgcgaaggactaaaaggtccaaaaggtgaaagaggacaatgt
ggacttatgggccttccaggactccctggcaccagaggcgattgtggcccccgaggactc
tgtggtccaaaaggagacataggggacccagggcttaaaggagaccctgggactgtcata
attccccctactccttgtccccttcttccgggtcctcctggtgctcctggtgcacctggc
ccggttggtgaagctggtgaacatggacctaatggtactgagggtccaaatggtattaag
ggacaaaaaggagattctgggatttctggacctactgggccagaaggaccacagggacta
tctggaaaccctggagagatcggcgagaaaggagcaaaaggatctcagggaccacaagga
tcagttggtgatgagggtcctcctggaccgtcttcctctggcttccttttggtgatacac
agccagtctgagattgtgcccacttgtccttcgggtctagcagagttatggaacggctac
agtctactatatctggaggctcaggaaagagcacacatacaagacctgggccaagcaggt
tcctgtttacgtatgttcagcacactaccattctcctgctgtaatatgaatggatgtgat
tatgccagccgcaacgacaaatcttattggctgtctacaaacgcctcaattccctcgaat
tccaccctgagggggatggaaattcaaccacacatcagcaggtgtgtggtgtgtgaggtg
tcatcgccagccattacattacacagtcaagacgggaatacaccagagtgtccattcaat
tggagaacactctgggtcggatattcatttcttatgcatacaggatcaggggacgaggga
gggggaccgtctctggcatcaacaggaagctgtttgcaggaattccacagtcagccgttt
gtggagtgccaaggtccgcttggcacgtgccaatattcccccaccttctacagtttctgg
ctgactagagtgaacatggagccctttaactctgttccttacagtactgttctcactgaa
gagaaccagctcgatagcatcagcacatgcagcgtctgcgtgacttaa

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