Carassius gibelio (silver crucian carp): 128030646
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Entry
128030646 CDS
T08819
Name
(RefSeq) tripartite motif containing 35-29
KO
K12012
tripartite motif-containing protein 35
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
128030646
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128030646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-C3HC4_3
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_5
zf-RING_2
Prok-RING_4
U-box
Sina_RING
Tweety
CorA
DUF3584
zf-Nse
NPV_P10
End3
Phage_GP20
Apolipoprotein
FliD_N
DUF1664
DUF4200
Fib_alpha
zf-RING_6
ATPase
DUF3958
SOGA
MYO6_lever
KapB
Motif
Other DBs
NCBI-GeneID:
128030646
NCBI-ProteinID:
XP_052474403
LinkDB
All DBs
Position
A16:complement(12683922..12688983)
Genome browser
AA seq
472 aa
AA seq
DB search
MASVKIVSVEDLNCPVCFDIFKTPVLLSCSHSICKECLQKFWRDRDIQDCPICRRRSSRD
EPPCNLVLKNLCESFTAESASGSEEVCNVHNEKFKLFCLDHKQLVCIVCRDSEKHSNHKF
SPVNEAVPAYKEQLNTALKSLQEKLEHAEKNKGECDTTVRHIKTQAELTERQIREEFMKL
HQFLQDEEEASITALRKEEEQKSQTMKEKLEDMNRQISALSDTIKDIEEKMNRSDVSFLH
SFNATMERAQSSQQDPQMLSGALINVADHLRNLTFRVWKKMQQLVQNSPVTLDPNTANTY
LILSDDLTSLTSSEKWQQVPDNPERFDEYSCVLGSEGFDSGTHFWDVEVGDNSEWVIGVT
TESNQRKGDVFFKTNVWCMWYEDGKYFSQSPQKPNRPVPVKEKLQRVRVELDWDRGKLSF
CDLVNNTLLRTITTSFKERVFPLFYSFDGSVPLKILPATVVVTTEKQFCMTR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgtgaagatagtatctgtagaagatcttaattgtccagtgtgctttgacatc
tttaagactcctgttcttctgtcatgtagtcacagtatctgtaaagagtgtcttcaaaag
ttctggagagacagggatattcaggactgtcccatctgcaggagaagatcctcaagagac
gagcctccatgtaatctggtgttaaagaacttatgcgagtcattcacagcagaaagtgct
tcggggtctgaggaggtctgcaatgtccacaatgagaaattcaaactcttctgcttggat
cataaacagcttgtgtgtattgtgtgcagagactcagaaaaacactctaatcacaaattc
agcccagtcaatgaggctgttccagcttacaaagagcagcttaatacagcgctgaagtcc
ttacaagagaagcttgaacatgcagagaaaaataaaggcgagtgtgatacaacagtccgg
cacatcaagactcaagctgagctcacagaacggcagattagagaggagtttatgaagctt
catcagtttctgcaagatgaagaagaagcttcaatcactgcactgaggaaggaggaagag
cagaagagtcagacgatgaaggagaagcttgaggatatgaacagacagatctcagctcta
tcagacacaataaaagacatagaggagaagatgaatcgaagtgacgtctcatttctacac
agctttaatgccacaatggaaagagcccaaagttcacagcaagatccacagatgctttct
ggagctttgattaatgtggcagatcatctgagaaacctgaccttcagagtctggaagaag
atgcagcaacttgttcaaaactctcctgtgactctggacccaaacactgctaatacttat
ctgatcctctctgatgatctgaccagtctgacaagcagtgaaaagtggcaacaagttccg
gataatccagagagattcgatgaatattcctgtgttctgggttcagagggctttgactca
ggaacacacttctgggacgtggaggttggagacaattcagagtgggttattggagtaacc
acagaatcgaaccaaaggaaaggagacgttttcttcaaaaccaatgtctggtgcatgtgg
tatgaagatggtaaatatttctcacaatccccacagaaaccaaacagaccagttccagtt
aaagaaaagcttcagagggtgagagtggagctggactgggacagaggaaaactctcattc
tgtgatcttgtaaataatacacttctacgcacaataacaacctccttcaaagagagagtc
tttccattgttttattcttttgatggatctgtccctctgaagatattaccagctacagta
gttgtaacaacagaaaaacagttttgtatgacgcgctag
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