Colletes gigas: 122399905
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Entry
122399905 CDS
T07492
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
cgig
Colletes gigas
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgig00535
]
122399905
Proteoglycans [BR:
cgig00535
]
Cell surface proteoglycans
Others
122399905
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
Big_9
Motif
Other DBs
NCBI-GeneID:
122399905
NCBI-ProteinID:
XP_043256898
LinkDB
All DBs
Position
Unknown
AA seq
2350 aa
AA seq
DB search
MFLNDMGLLMFLAVTASLLGCCQTDEKVSFYGASYIHLPVQEAKGATDISFRFRTHLADA
MLLLAAGKTDYCLIKLEAGRLKVHINLGAGESEMASAHGLTLNDLSWHKVNLTRREANIT
LQIDVIHTTRYLLPGRFFELNIHYGVFIGGQGYFNELFLGHTDYLRGCMADIIYNGARVI
EHAKSRKGQSQATAVTWGCSPEFDATRSTEVSFVEDGAFTAIPRPIPRSGSRWEFELKTG
AETGLLLYNTGQSSYADYLGIELFEGKIRLLMNKGNGPTELIHDTPVADGKWHRVVVDFN
PSGIGIAVDQQEKTITLPSGGNRYLDLADTLYVGGTELNKRARALGKGLRSGDVSYKGCL
RDMLLDKKELGLPDVKISQGVVVGCVWGFPCIEHDPCVSGAVCSQLGVSSFECNCDQPVC
IRPNRAEDYKVYSKANLPVNLEILSVRPLLVSEGEHVLVTSDNIAMVLDIAKYGVEEDGV
IFTLVTPPTNGTLSLDHLTTRTENAFTLQDISRDKIQYMHDGGETTEDSMIVEVTLVAGT
GYTLPGYLQGRLMFPLHVNVTPVNDPPLLEISTTVLRLAQGTRKILTKVLIWAIDADTPS
DMLVYTVLRTDADAGYVERVTYPSRPIDTFTQAELMQGLIAYVHRGNAKPNAKLELQVSD
GVDSSKPASLRVAAHPLEINLMQNTGLVVVHRSFSYLTPANLSFTTNSDDNTIDIRCDIV
SPPQYGAIQKLRDASSSWTNVDHFTSRDVEQHTIRYLHNEGSPNQDEFKFQASVREVRAQ
HTYDFRITFIDLELKEMKRIPINFTNVAEVTVAGLNLRYQTNPLLTAFNKIVFTLKTGPR
YGNLFLSSRRLNVGDAFSQDDVDSGRVKYRLFKRAYSTILDEFGFKVSAPQCVDMHGNLV
LKHYLSKNVKPLDSVETLRVDEGSRVPVRILRTNPKSYEDKVITSLMYNLTIVPRHGWLI
VTNSSRSHTRNNTHYFVSEELNSQRVYYVHDDSETREDSFQFVAIATDAVDFMYVGLFRV
EVTMKNDNAPERVVDRVFHVVSRSKRLLTNKDLAYTDRDVDTKPSDLIYTRLDSQRYGVY
RVSNPTVQILMFSQQDIDDKQILFKHQGDDRGKFEFGVTDRRFYTAGVLEIQASPPYVRL
KENNGSVVQFNRLVGLGPDELDVETNVYTTDKDIKYSVLDKPKHGVLLKHGRETSSFTEE
NLRNGIVAYKHLGGSLVKDDFRFKVTIEGAETEGVFPIKVYPESYWQPLIVQNNKTVFVE
EATSVLLNRKSLEVMHPKIPESEIVYFLKEWPQNGYLELQIHDEHSEEIREDYIGNAVKT
FDQKMINEGRVYYVQSVINQTNDRFVVDATNGITWLRDLSVNFVIVPEKLYVEAKGVAVV
EGKSTTLDETDFSILTPYYFGKVTDYRITEKPRHGVVLDLSKNSPVREFSQKHLTADVIS
YKHNGDEYPKDCFKMVLVAEDKVSEPFNVWVTVQPVNDELPVLVNRTKLTVWQGGSIVLT
PDNLAAIDNDTSAHDLTFNVTGARNGFVSLRSAPESDVYNFTQEQIDQSRIIFTHTNGSD
AEFNFVLNDGAHTSETYTVLVATKPIRLSIERNAALNVFPLTRKVISDKLLLTKCMDETR
EIKYMVRNGPHLGKIIMETSEGAWLNVDQFSQRDINGSKVYYEHTKQFMDLAANDSFTFD
VEARFAESLTNQVLQIDISVSSGGLNRYIFVKNVRVEEGGSAQVIMNISGIVSFLQTHAG
IENPVVLSRLIGQPSHGHVKILPDVNITTFSQTQIEGGEIVYCHDHSDTLEDRINFSLYL
TPGHILLCNASVPVIVEPVNDKPFKLITNNPSIRVVQNQNQTITSKNLLTEDPDTPPEEI
VYDLISGPTYGRLLLLPSNENVSVVQQVNKFTQQDIDSNRLVYEHDGPHQAALFYFRVDD
GRFPSQYKVFNILVLPIKLNVTILGPVYLQQGSSVALITESNLKLDTNARRDLVVYEITN
SPKHGVLYVRDGAAASFKQTDLASKSVMYMQKNMTVSNDSLVLTAKVSGFEQQHIRLEIK
VVPLMIMNPMIALAGEKTRISLKYMDATPLAKLTSSNPVYAVMKKPKFGKVKRIIRSSSS
SGEKRGTREKEVVRFSHQEVVSGVIYIVCRKIPTMEYEGVLDSFTFVLTASIFQPAVGEF
EFRVKLDMDENNITLGGPMDPVGHEGEMAIAPNMSNDYLPVLGMLLGVFLLGVLVIITIR
CRHNRYKHAEEEKSETSPAVGVMPLPRPPDHLMPATPHLKRFANDHNSVAASTPLPVPPT
MTSTLPQCKVIPLSPLESSAGSEVDVSARYPYGVADGDEWSSFDTSDLPCQSATAQRANN
PMLRRNQYWV
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcaacgacatggggctgttaatgttcttagcagtaacggcgtcccttttgggc
tgctgccagacggatgaaaaagtgtcgttttacggggcgagctacattcatcttccggtc
caggaagccaagggtgcgaccgacatcagcttccggttccgaactcatctcgcggacgct
atgctgctattggccgccggcaagacggattactgcctgatcaaactcgaagccggcaga
ttgaaggttcacataaatttgggagcaggggagagcgagatggcgagtgcccatggtttg
acgctgaacgatttgagctggcacaaggtgaacctgaccagaagggaggctaacatcacg
ttgcagatcgacgttatacacacgacgaggtatctactgccgggacgtttcttcgagctg
aacatacactacggcgtcttcatcgggggacagggttacttcaacgagctatttctaggt
cacacagattacttacgtggctgcatggctgacataatctacaacggggcgagggtaata
gaacacgccaagtcgaggaagggccagtcgcaggctacggccgtaacgtggggctgttct
ccggaattcgacgcgacgaggagcacggaagtcagtttcgtcgaggatggcgcgttcacg
gcgatcccgaggcccattccgcgttcaggctcgagatgggagttcgagctgaagaccggc
gctgagactggtctgcttctctacaacaccgggcaatcgtcgtacgccgattacctcggg
atcgagttgttcgagggtaaaattcggcttctgatgaacaaagggaacggacctacagag
ttgatacacgacacgccggtggccgatggcaaatggcacagggtggtcgttgatttcaat
ccgagcggaatcgggatcgcggtcgaccagcaggaaaaaacgatcacgctgccgtccggc
ggaaatcgttacctggaccttgcggacaccctctacgtgggcggcacggagctgaacaaa
cgcgccagagcgctgggcaaaggtctgaggtccggcgacgtgagctacaagggttgcttg
agggacatgctgctggacaagaaggaactcggtctgcccgacgtgaagatcagccagggc
gtcgtggtcggctgtgtctggggattcccgtgcatcgagcacgatccctgcgtttccggg
gcggtttgctcccagctgggcgtcagctcgttcgagtgcaactgcgaccagccagtgtgc
atcaggccgaaccgcgccgaggattacaaggtttattcgaaggcaaatttacccgtgaac
ctggagattctctcagtgagaccgctgctggtatccgagggggagcacgtgctggtgacg
agcgataacattgccatggtgttggacatagctaaatatggggtggaagaggacggtgtt
atcttcaccttggtaacgccacccacgaatggaaccctgtcgctggaccacctaacgacc
agaaccgaaaatgccttcactctccaagacattagtcgcgataagatacaatacatgcac
gacgggggcgagaccacggaggacagtatgatcgtggaagtgacactcgtggcaggaact
ggttacacgttgccgggctacctccaaggacgactaatgtttccgctccacgtcaacgtg
acgcccgttaatgatccaccgttgctcgagatatcgaccaccgtgctgcgtctggctcaa
ggcacgaggaaaattttgacgaaagtgttgatttgggcgatcgacgccgacacgccgtcg
gacatgttggtttacacggtcttacgtaccgacgcagacgccggctacgtcgagagggtg
acttacccgtcgcggcccatcgacacgtttacccaggcggaattaatgcaaggattaatt
gcctacgtgcaccgtggaaacgcgaaaccgaacgcgaaactggaactgcaggtcagcgac
ggggtagacagcagcaagccggcgagcttgagggtggcggctcatccgttggagataaat
ctgatgcagaacacgggtctggtcgtggtgcaccgatcgttctcctatctgaccccggcg
aacctctccttcaccacaaactccgacgacaacacgatcgacatacgttgcgacatcgtc
tcgccgcctcagtacggcgcgattcaaaagctgagggatgcctcgagcagctggacgaac
gtggaccatttcacgagcagggacgtcgagcagcacacgatccggtacctccacaacgag
ggtagcccgaaccaggacgagttcaagttccaggcgagcgtccgtgaggtcagggcccaa
cacacctacgacttccggatcaccttcatcgatttagagctgaaagagatgaagaggata
ccgattaacttcacgaacgtggccgaggtgacggtggccggtctgaacctcaggtaccag
acgaaccctctgctgacagcgttcaacaagatcgtgttcaccttgaagacgggaccaaga
tacggtaacctgttcctctcgagtcggaggctgaacgtcggggacgcgttcagccaggac
gacgtcgactccgggcgtgtcaagtaccgactgttcaagagggcctactcgaccatcctg
gacgagttcgggttcaaggtcagcgcgccccagtgcgtcgacatgcacgggaacctggta
ctgaagcactatctcagcaagaacgtgaaaccgttggacagcgtggagacgctcagggtc
gacgagggttccagggtgccggtgaggatactgcgtacgaacccgaagagctacgaggac
aaggtcatcacgtcgttgatgtacaatctgacgatagtgccccgtcacggatggctgatc
gtcacgaacagctcgaggtcccacacgaggaacaacacccactacttcgtgtccgaagag
ctcaactcccaacgggtctactacgttcacgacgactcggagacgcgggaggactcgttc
cagttcgtggcgatcgccacggacgcggtggacttcatgtacgtaggtctgttccgcgtc
gaggtgacgatgaagaacgacaacgcaccggagcgcgtggtcgatcgggtgttccacgta
gtctcgaggagcaaacgtttgctcaccaacaaggacctggcgtacacggacagggacgtg
gacacgaagcccagcgatctgatttacacgaggctggacagccagaggtacggtgtctac
cgggtgtccaatcccacggtgcagatcctcatgttcagtcagcaggacatcgacgacaag
cagatactcttcaagcatcagggcgacgatcgcgggaagttcgagttcggcgtgaccgac
aggcgattttacaccgctggcgtgttggagatccaagccagtccgccttacgtcagactg
aaagagaacaacgggtcagtggtgcagttcaatcggttggtgggcctagggccggacgag
ctggacgtggagaccaacgtgtacacgaccgacaaggacattaagtactcggtgttggat
aaaccgaagcacggggtgctgctgaagcacggcagagagacgagcagcttcaccgaggag
aatctgagaaacggtatagtggcgtacaaacacctggggggatcgttggtcaaggacgac
ttcaggttcaaggtgacgatcgagggcgccgaaactgagggcgtatttccgatcaaggtc
tacccggagagctactggcagccgttgatcgtccagaacaacaaaacggtgttcgtggag
gaggcaacgagcgtcctgctgaacagaaagagcctcgaggtgatgcatcccaagataccg
gagtcagagatagtatatttcttgaaagagtggccgcagaacgggtacctggagctgcag
atccacgacgagcacagcgaggagatccgcgaggactacataggcaacgcggtgaagacg
ttcgatcagaagatgataaacgagggccgcgtctactacgtccagtcggtgatcaatcag
accaacgacagattcgtcgtggacgcgaccaacgggataacctggctacgcgacctcagc
gtcaacttcgtcatcgtaccggagaagctgtacgtcgaggcgaagggagtcgctgtggtc
gaggggaagagcaccaccctcgacgagacggacttctccatcctcactccctattacttt
ggcaaagtgacggactatcggatcacggagaaacccaggcacggtgtcgttctcgatctg
tcgaaaaattccccagttagagagttctctcagaaacacctgaccgctgacgtaatatcg
tacaaacacaatggcgacgagtacccgaaagattgcttcaagatggtcctcgtggctgag
gacaaagtcagcgagcccttcaacgtgtgggtgaccgtgcaacccgtcaacgacgagcta
cccgtgctggtcaacaggaccaagttgacagtttggcagggtggttcgatcgtcttgacg
cctgacaacctggcagccattgacaacgacacgtcggctcatgacttgacgttcaacgtg
accggtgccagaaacgggttcgtatcgctgagatccgccccggaatcggacgtgtacaat
ttcacgcaggaacagattgaccagtcgaggatcattttcacacacacaaatgggtccgat
gctgagttcaatttcgttctgaacgatggggcgcacacgtccgagacctacacggtgctg
gtggccaccaaaccgatacggttgtccatcgagcgcaacgctgcgttgaacgtattcccg
ttaactagaaaagtgatatcggataagctgttgttgacaaaatgcatggacgagacgcgg
gagattaagtacatggtgaggaacggaccgcatctgggcaaaatcatcatggagacgagc
gagggcgcgtggctgaacgtcgaccaattctcccagcgagacatcaacggtagtaaagtg
tactacgagcacaccaaacagttcatggaccttgccgccaatgactcgttcacgttcgac
gtagaggcgcggttcgcggaatccttgaccaaccaggtgttgcagatagacatttcagtg
tccagcggcggattgaacagatacattttcgtaaagaacgtgagagtggaggaaggagga
tccgcccaagtgatcatgaacatcagtgggatcgtgtcgttcctccagacccacgctggc
atcgagaacccggtcgttctctcaagactgatcggtcaacccagccacggccacgtgaag
atcctcccggacgtgaacataaccacgttctctcagactcagatagagggcggtgagatc
gtctactgccacgatcactcggacactttggaagatcggatcaacttctcgctgtacctg
acgcccggtcacatcctcctctgcaacgccagcgtgccggtaatcgtcgagccggtgaac
gacaagcccttcaagctgatcacgaacaaccctagcatcagagtggtgcagaatcagaat
caaacgataactagcaagaacctgctgacggaggaccccgacacaccgccggaggaaatc
gtgtacgacttgatatcagggcccacttacggtcgtctgttgctcctgccctcgaacgag
aacgtctcggtggtgcaacaagtgaacaagttcacgcagcaggacatcgactcgaacaga
ctggtctatgaacacgacggacctcaccaagctgctctgttctatttccgggtagacgac
ggtcgtttcccctcccagtacaaggtcttcaacatcctcgtcctgcccatcaagctgaac
gtgactatccttgggcccgtctacctgcaacaaggatcgagcgtggctctgataaccgaa
agcaacctgaagctggacacgaacgcgagacgggacctggttgtctacgagataacgaac
agtccaaagcacggggtgctgtacgtgagagacggggcggcggccagcttcaagcaaacg
gacctagcgtctaaaagcgtgatgtacatgcaaaagaacatgaccgtgtcgaacgacagc
ctggtgctgaccgccaaggtgagcgggttcgagcagcaacacataagactagagatcaaa
gtggtgccgctgatgatcatgaaccctatgatcgcgctggccggggagaaaacgcggata
tctctgaaatacatggacgccacaccgctggcgaaactgaccagcagcaaccctgtctac
gccgtgatgaagaagccaaagttcggcaaggtgaagaggatcatcagaagttcgtcgtcg
tccggcgagaaacgtggaacccgggaaaaagaggtggttcggttctcccatcaggaggtg
gtgtcaggtgtgatctacatagtctgcaggaagatcccgacgatggagtacgagggtgtc
ctcgacagtttcacgttcgtcctgacggcctccatcttccaaccagccgtgggcgagttc
gagttccgggtgaagctggacatggacgagaacaacattactttgggcgggccaatggac
cctgtagggcacgagggcgagatggccatcgcgccaaacatgagcaacgattacctaccg
gttttagggatgctcctgggcgtgttcctgctgggcgtgctggtgatcatcaccatcagg
tgcaggcacaacaggtacaagcacgcggaggaggagaagtcggaaacgtcaccggcggta
ggcgtgatgcctcttccaaggccaccggatcacctgatgcccgcgacgccgcatttgaaa
cggttcgccaacgaccataacagcgtggccgccagcacgccgctaccagtgccgcctacg
atgacgtccacgttgccacaatgcaaagtgatacctctgagtcctctggagagcagcgct
gggtcagaggtggacgtatccgccaggtatccctacggcgtcgcggacggcgacgagtgg
agcagctttgacacgtcggacctgccctgccagtccgccaccgcgcaaagagccaataac
cccatgttgaggagaaaccagtactgggtctag
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integrated database retrieval system
