Corynebacterium glutamicum ATCC 21831: AR0_06270
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Entry
AR0_06270 CDS
T03361
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgj
Corynebacterium glutamicum ATCC 21831
Pathway
cgj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR0_06270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgj03019
]
AR0_06270
03009 Ribosome biogenesis [BR:
cgj03009
]
AR0_06270
Enzymes [BR:
cgj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AR0_06270
Messenger RNA biogenesis [BR:
cgj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AR0_06270
Ribosome biogenesis [BR:
cgj03009
]
Prokaryotic type
rRNA helicases
AR0_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
AIK87626
LinkDB
All DBs
Position
1290433..1292640
Genome browser
AA seq
735 aa
AA seq
DB search
MSNTENVNGDVEQPNNVISSESQETPQGDSASADFALETPTNNVEDAPASEGSEEITRVA
DTSEDADSADADNASNVINENEDSSEGANQPSNESSSTEAKSGFDALGLPERVLDAVRKV
GYETPSPIQAQTIPILMEGQDVVGLAQTGTGKTAAFALPILSRIDKSVRSPQALVLAPTR
ELALQVADSFQSFADHVGGLNVLPIYGGQAYGIQLSGLRRGAHIVVGTPGRIIDHLEKGS
LDISGLRFLVLDEADEMLNMGFQEDVERILEDTPDEKQVALFSATMPNGIRRLSKQYLNN
PAEITVKSETRTNTNITQRFLNVAHRNKMDALTRILEVTEFEAMIMFVRTKHETEEVAEK
LRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVERISHVLNFDIPN
DTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAPLHEMELPTVDQVNDFRK
VKFADSITKSLEDKQMDLFRTLVKEYSQANDVPLEDIAAALATQAQSGDFLLKELPPERR
ERNDRRRDRDFDDRGGRGRDRDRGDRGDRGDRGSRFDRDDENLATYRLAVGKRQHIRPGA
IVGALANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDTRISGQLINIERDSGG
RPPRRFERDDRGGRGGFRGDRDDRGGRGRDRDDRGSRGGFRGGRDRDDRGGRGGFRGRDD
RGDRGGRGGYRGGRD
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccgagaacgtcaacggcgacgtagaacagccgaataacgtcatttcgtcg
gaatctcaggaaaccccgcagggtgactcagcatcagctgacttcgctctcgaaacccca
accaacaatgttgaagatgcaccagcatctgagggtagcgaagagatcaccagggttgcg
gatacttctgaggacgccgactctgcagatgcagacaacgcgagcaatgtaatcaatgag
aatgaggactcctcggaaggtgctaaccagccttcaaacgagtcatcctctacggaagcc
aagtccggcttcgatgcactcggactgccagagcgtgttcttgacgctgtgcgcaaggtg
ggttacgaaactccttccccaattcaggcacaaaccatcccaatcctcatggagggccag
gatgttgttggtctagcacagaccggtaccggtaagaccgcagctttcgcgctgccaatc
ctttcccgtattgacaagtccgtgcgcagcccacaggcacttgtgcttgcccctacccgt
gagctggcacttcaggttgctgactccttccaatccttcgctgaccacgtcggtggcctg
aacgttctgccaatctatggtggacaggcttacggcattcagctctctggcctgcgtcgt
ggcgctcacatcgtcgtgggtaccccaggccgaatcatcgaccacctcgaaaagggctcc
ctggatatctccggactgcgcttcctcgtgctcgatgaagcagacgagatgctgaacatg
ggcttccaggaagatgtcgagcgcatcctcgaggacaccccagacgagaagcaggttgca
ctattctccgcaacgatgccaaacggcattcgtcgcctgtccaagcagtacctgaacaac
cctgctgaaatcaccgttaagtccgagaccaggactaacaccaacatcacccagcgcttc
ctcaacgttgcacaccgcaacaagatggatgcactgacccgtattctcgaggtcaccgag
tttgaagcaatgatcatgttcgtgcgcaccaagcacgaaactgaagaagttgctgaaaag
ctccgtgcacgcggattctccgcagcagccatcaacggcgacattgctcaggcacagcgc
gagcgcaccgtcgaccagctgaaggacggccgcctagacatcctcgttgcaaccgacgtt
gcagcccgtggtcttgacgttgagcgcatctcccacgtgcttaacttcgacattccaaac
gacaccgagtcctacgttcaccgcatcggccgcaccggccgtgcaggtcgtaccggcgag
gcaatcctgttcgtgaccccacgtgagcgtcgtatgcttcgctccatcgagcgcgcaacc
aacgcaccactgcacgaaatggaactgccaaccgtcgatcaggtcaacgacttccgcaag
gtcaagttcgctgactccatcaccaagtccctcgaggacaagcagatggacctgttccgc
accctggtcaaggaatactcccaggccaacgacgttcctctagaggacatcgcagcggca
ctggcaacccaggcacagtccggcgacttcctgctcaaggagctcccaccagagcgccgc
gagcgcaacgaccgccgtcgtgaccgtgacttcgacgaccgtggtggacgtggacgcgac
cgtgatcgtggagaccgtggagatcgcggagatcgtggctcacgcttcgaccgcgacgac
gagaacctggcaacctaccgcctcgcagtgggcaagcgccagcacatccgcccaggcgca
atcgttggtgcacttgccaacgaaggtggcctgaactccaaggacttcggccgcatcacc
atcgcagccgaccacaccctggttgaactgccaaaggacctcccacagagcgttcttgac
aacctgcgcgacacccgcatctccggccagctcatcaacatcgaacgcgactccggtgga
cgcccaccacgccgcttcgagcgcgatgaccgtggcggacgcggcggattccgcggcgac
cgtgatgaccgcggtggacgtggacgtgaccgtgacgatcgtggaagccgtggaggtttc
cgcggtggacgtgaccgtgacgatcgtggcggacgcggtggattccgtggacgcgacgac
cgcggagaccgtggtggccgtggcggttaccgtggcggacgcgattaa
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