Corynebacterium geronticis: CGERO_09875
Help
Entry
CGERO_09875 CDS
T06788
Symbol
rfbC
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
cgk
Corynebacterium geronticis
Pathway
cgk00521
Streptomycin biosynthesis
cgk00523
Polyketide sugar unit biosynthesis
cgk00541
O-Antigen nucleotide sugar biosynthesis
cgk01100
Metabolic pathways
cgk01110
Biosynthesis of secondary metabolites
cgk01250
Biosynthesis of nucleotide sugars
Module
cgk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CGERO_09875 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CGERO_09875 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CGERO_09875 (rfbC)
Enzymes [BR:
cgk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CGERO_09875 (rfbC)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CGERO_09875 (rfbC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
NAD_binding_4
Polysacc_synt_2
Aldo_ket_red
Motif
Other DBs
NCBI-ProteinID:
AZA12262
UniProt:
A0A3G6J2U2
LinkDB
All DBs
Position
2073800..2075257
Genome browser
AA seq
485 aa
AA seq
DB search
MKTFGTPLAAHATAIEGLFILDLTVHGDNRGWFKEQWQRAKFRELHPVAADGSSAVAGAR
ALREFEPIQQNISFNASPGVTRGLHAEPWDKLVSVANGRVFGAWCDIREGSATYGEVLTC
EIGPERAIFVPRGVANGFQALAQDTVYTYLVNGHWSADANYSFVNLADPTLGIDWPLPIT
EWSQKDREHPQLFDATPVPQKQTLIIGADGQLGQALQAVLPNALTWTRSDWDMRKPLPEM
DWSQVGVIINAAAYTAVDQAEDDRATSWAVNATAVQRLAAVANEHEITLVQVSSEYVFDG
SNQCHDESEMLSPLSVYGQSKAAGELAAMGARRNYIVRSSWVVGNGNNFVATMCSLAKRD
IHPKVVNDQFGRLTFADDLAFGIVHLLQEQAPWGVYNLSNSGEVVCWADIAREVYRLCGR
SAKDVEPVSSEEYFGTQPHAPRPTHSALNLAKIEASGFVPRDWRPALAEYVRTVEVRPSK
EAGAQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttcggcacaccgctggcagctcatgccaccgcgatcgaggggctgttcatc
ctcgacctcacggtgcacggagacaatcgcggatggttcaaggaacagtggcagcgagcg
aaattccgcgaacttcaccccgtcgcggcagacggatcaagtgcagtggcaggcgcccgc
gcgctgcgggaatttgagccgattcagcaaaatatctcttttaatgcctcacctggggtt
acgcgcggtttgcatgccgagccctgggacaagctcgtctccgttgcaaacggtcgcgta
tttggagcgtggtgtgatatccgcgaaggctcagccacatacggtgaagtcttgacgtgc
gaaatcgggccggaacgcgcaatattcgtaccccgcggggtagccaacggttttcaggcg
ctggcgcaggacaccgtctacacctacctggtgaatggccattggtctgccgatgccaac
tacagctttgtcaatctcgccgacccaaccttgggcatcgattggcccctgcccatcacc
gaatggtcgcagaaggatcgtgaacacccccagcttttcgacgccacccctgtcccccaa
aagcaaacgctgatcatcggcgctgatggtcagctcgggcaagcgctccaagcagtcctg
cccaatgcacttacgtggacacgcagcgattgggatatgcgcaagccgctgccggagatg
gattggtcgcaggtgggggtgatcatcaatgccgccgcttacaccgcagtggatcaggcc
gaggatgatcgagccacaagctgggctgtgaatgcaaccgctgtgcaacgcttagctgct
gtagcaaatgagcatgagatcaccttggtgcaggtatccagcgaatatgtttttgacggc
tccaatcaatgccacgatgaatcagaaatgctcagcccgttgagtgtctatggacaatcg
aaggctgcgggcgaactcgcagcaatgggagcaagacgaaactatattgtgcgcagtagt
tgggtcgttgggaatggcaataatttcgtcgccaccatgtgctccttggccaaacgcgac
attcatccgaaggtggttaacgaccagttcggacgcctaacattcgccgacgacctcgcc
tttggcatcgtgcatctcctccaagagcaagcgccgtggggcgtgtacaacctcagcaat
agcggtgaggtcgtgtgctgggcagatatcgcccgcgaagtgtatcgactgtgcggacgc
tccgcgaaagacgtagagcctgtgagcagcgaagaatattttggcacgcaacctcacgct
cctcgtcccacacactccgcattgaacttggcaaaaattgaagccagtggatttgtgccg
cgcgactggcgcccggcgttggctgaatacgtgaggactgtcgaggtacgaccatcgaag
gaggctggggcacagtga
DBGET
integrated database retrieval system