Cotesia glomerata: 123262881
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Entry
123262881 CDS
T07738
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cglo
Cotesia glomerata
Pathway
cglo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123262881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cglo03041
]
123262881
Enzymes [BR:
cglo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123262881
Spliceosome [BR:
cglo03041
]
Complex A
U2 snRNP components
U2 related factors
123262881
Complex B
123262881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
123262881
NCBI-ProteinID:
XP_044581293
LinkDB
All DBs
Position
LG4:complement(18402400..18411830)
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AA seq
1034 aa
AA seq
DB search
MGRKHEKDRHHKKRSKSRSRSRSVTPEKKRHRSRSRERTKKKSSRRDRRSHSRDRERRSH
SQDRDRDRQSRSRENIRRSRSRDCDPLPHSRYRDRDRRDRKRERRHGDSKEIPSDPKPRK
RSRSKERKNKEKHDEELPFDHTKLDKDEEQKRLELEMQKRRDRIERWRSERKKKELEAST
NDAKPNLADLQLPSKKWSLEDDSDEEIPVVKKEDKPEVAEVVDPVDEEEIDPLDAYMAGV
QEEVRKVSKVAPKSGSNANGNSSNSSGVMIITGVARKRVQKQKGELIEQNQDGLEYSSEE
ETENLHETAAGIANKQKRELPKVDHTTTEYLPFRKAFYVEVPEISRMTPQEVELYKEELE
GIKVKGKGCPKPMKSWVQCGITKKELDVLKKLGHEKPTPIQSQAIPAIMSGRDLIGIAKT
GSGKTLAFLMPMIRHILDQPPVADGEGPIALIMTPTRELCMQIGRDSKKFTKSLGLRHVC
VYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLKRVSYVVLDEADRMFDMG
FEPQVMKIMENVQPNRQTVLFSATFPRQMEALARRILQKPVEIQVGGRSVVCKEVEQHVV
VLDEEQKFFKLLEILGHYQNKGSVIVFVDKQEYADMLLKDLMKASYACMSLHGGIDQCDR
EATIMDFKAGRTKLLIATSVAARGLDVKQLVLVVNYDCPNHYEDYIHRCGRTGRAGNKGF
AYTFITPEQERYAGDIIRAHELAGVPVPEELKELWDKYKARLAADGKKVHTGGGFSGKGF
KFDESEAALANEKKKFQKAALGLQDSDEEDIESEMDQKIEIMLAPKRSIKEVSHPGIFGQ
PGQGQSTATDKLKLAQKLASKINFEKNLGPEAKGVTQQAAKAILEGSRSINLITPKTVVA
QIAAKINTKLNYQPSDEDLLVDNSEVKEQTFKRYEEELEINDFPQQARWRVTSKEALAQI
SEYSDAGLTIRGTHVPPGKKPPEGERKLYLAIESTSEFAVSKARAEVCRLIKEELMKMQS
SGAHSGSRGRYQVL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtaagcatgaaaaagatcgccatcacaagaaacgatcaaaatcaagatctcgt
tcgcgttcagtaacaccagaaaaaaaacgccaccgttcccgtagccgtgagcgcacaaaa
aaaaagtcatcccgccgtgaccgacgaagccactcacgagatcgtgagcgacgaagtcat
tcccaagaccgagaccgtgatcgacaaagccgttcccgagagaacatccgacgaagccgt
tcccgtgactgtgatccactgcctcattcacgatatcgtgatcgagatcgtcgagatcgc
aagcgagagcgaaggcatggtgatagtaaagaaatcccctcagacccaaaaccacggaag
cgatcgcggtctaaagaacgtaagaacaaggagaagcatgacgaagaactgccctttgac
cacaccaaactcgacaaagacgaggaacagaaacggctggagctagaaatgcagaagcgt
cgtgaccgtatcgaacgttggcgttccgaacggaagaaaaaggaattagaagcttccaca
aacgacgcaaagccaaatctcgctgatctccagttgccgtctaagaaatggtctttggaa
gacgacagcgatgaggaaattcccgtggttaaaaaagaggacaagccagaggtggcagag
gtggtagatcccgttgatgaagaagaaatcgatcctcttgatgcttatatggctggagtc
caggaagaagtccggaaagttagcaaagtggcacctaaaagcgggtctaatgctaacgga
aacagtagcaacagtagcggagtgatgataatcactggagtcgctagaaaacgagttcag
aagcaaaaaggagagttaattgaacaaaaccaggacggccttgagtattccagtgaagaa
gagaccgaaaacttgcatgaaacagctgctggaattgctaacaagcaaaagcgcgagttg
cctaaagtagatcatactaccactgaatacttaccgttccgtaaagcattctatgttgaa
gtcccagagatttccagaatgacccctcaggaggtagagttgtataaagaagagttagaa
gggatcaaagttaagggcaaagggtgtcctaagcctatgaagtcatgggtacagtgtgga
atcactaaaaaagagctagatgtgctaaagaaactcggacatgagaaacccactccaatt
cagtctcaggcgattcctgccataatgtccggtagggatttgataggaatcgccaagacg
ggaagcggaaaaactcttgcgtttttgatgcccatgattcggcatattctggatcaacct
ccagtagcggacggagaaggccctattgcgttgataatgaccccgactcgcgagttgtgt
atgcaaattggtagagactcgaagaagttcactaaatctctggggcttagacatgtgtgc
gtttatggtgggacgggaatttctgagcagattgcggagttaaagcgtggggcggaaata
attgtatgtacgccgggtagaatgattgatatgctcgcggctaatagtggtagagtgact
aatttgaagagagtgagttatgtggtgctagatgaggcggataggatgtttgatatgggg
ttcgaaccccaagtgatgaagatcatggagaacgtccagccaaatcggcaaacggttttg
tttagtgctacctttccgaggcaaatggaagctttggcgaggaggatcttgcaaaagccg
gtggagattcaggtaggtggaagatctgtagtttgtaaggaagttgagcaacatgtggtt
gttcttgatgaggagcagaagttcttcaaacttctggagattttagggcactatcagaac
aagggctcggttattgtttttgtggataagcaggaatatgctgatatgttgcttaaggat
ttgatgaaggcttcgtatgcttgtatgtctttacacggagggattgaccagtgcgatagg
gaagcgacgatcatggactttaaagctggaaggactaagctactaattgccacttcggtt
gctgctagagggttggatgttaagcaattggttttggtggttaactatgattgtcctaat
cactatgaagactatattcatcggtgtggaagaacaggtcgggcggggaacaaagggttc
gcgtataccttcatcactcctgaacaggaaagatatgctggggatatcattcgcgctcat
gaattagctggggttcccgttccggaagaattgaaagaattgtgggataagtacaaggct
agattggcggctgatgggaagaaggttcatactggaggcgggtttagtggaaagggattc
aagtttgatgagtcggaagctgcgctggctaatgagaagaagaagttccagaaagcggct
ttagggttgcaagattctgatgaggaggatattgaaagtgagatggatcagaagattgaa
attatgctggcgcctaagaggagtatcaaggaagtttcgcatccggggatttttggacag
cctgggcaaggacagtcgactgctacggataagcttaaattggcgcagaagttagcgtcg
aaaattaattttgagaagaatttggggccggaggctaaaggtgttactcagcaggctgct
aaggctattcttgagggatctagatcgataaatctcatcactcctaaaactgtcgtcgca
caaatagcagccaagatcaacaccaaactgaactaccaaccgagtgatgaagatcttcta
gtagacaatagtgaagtcaaagagcagactttcaagaggtacgaagaggagttggaaata
aacgactttccgcagcaagcacgttggcgcgttactagtaaggaagcacttgcccaaata
tcagaatactccgacgctgggttgaccatcagaggtactcatgttccgccaggaaagaag
ccaccagagggcgaacggaaactctacctagccattgagtctaccagcgaatttgctgta
agcaaagccagagccgaggtttgccggttaatcaaagaagaattgatgaagatgcaatca
tcgggtgcccatagcggctcgcgcggacgttatcaagtcttgtaa
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integrated database retrieval system
