Cotesia glomerata: 123266516
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Entry
123266516 CDS
T07738
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cglo
Cotesia glomerata
Pathway
cglo03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cglo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
123266516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cglo03400
]
123266516
Enzymes [BR:
cglo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
123266516
DNA repair and recombination proteins [BR:
cglo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
123266516
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
BRCT
RNA_ligase
BRCT_2
DNA_ligase_IV
Motif
Other DBs
NCBI-GeneID:
123266516
NCBI-ProteinID:
XP_044586731
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All DBs
Position
LG6:3376227..3380187
Genome browser
AA seq
893 aa
AA seq
DB search
MVSLASKIKFNEFCNLLEEILSASPKNKVKILTDFLNKCREVGKELKDENPDADISLFPI
MRLLLSTKDHERGPYGLKEKSLGILYVRVFCLGNSDDAKQIINYREPTEQKTPSSGDLAG
KIYWILKRRQTKNICKLSIEQINSLLDKIAEKNRQNKSKDPEFIRIAQQCSALEIKWLTR
IILKSIRIGVGEKQILNAYHPDAESLFGEQSNLREVCDTLHNLKYRPKKTCNICVLSPFK
PMLLERFYIERISELFTTTPSYIIQTKFDGERSQLHMSNGKFKYYTRHGYDITNHPSFGD
SPLSGNLTSKISSLLNPECRSIILDGELMGWHKEKLCFGSKGMNFDVKKLTSKSVHQPCL
MAFDIILYNDKLLVDLPLKERLKVLESAFTPQDGVLMRSNNTLVTSSDQIREIFNQSLDN
YDEGIVVKDSLGIYKPNSREGNKCFKIKAEYSDNLVEDIDLLIVGGYYGQGKYSGMYNSF
LVALVVPGPSEETRKFQSVVGVSSGIPRDKLRELNAKFAESWTKERPSCVVGPSKDPPDS
WLPPEKSIVLQIRASELIKCKTQPTRYTLRFPRVKKVREDKPWYDACTITEFNNLIKHRG
VVNKLTKRHATEEDEKCLPAKRRDTEAKFIKSVKMDEKHFGVRAADVQRKTRLMEGKEFC
VINGDGKVGKEDLERILLEHSAKVVQNPGRNTFCVLIGDEKILKARNLIECAKYDVAKIS
WIARATKEENWGRLVEFFPWEMLAMRKETRDRLEVMFDEYWDGFFVDVDLESLKRSLERA
EDLEDCREFEEEDYRELEEECRDLEVRVFENVVGHFVEDDWLKKPFVFLRGKICEEIDGN
TTHVFVGGNWDRESVYRKINQSGKNFIKVMDKKWVRECLDRGRLLPENDYIVQ
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggtatcactagcatccaaaattaaatttaatgaattttgtaatttattagaagaaatt
ttatcagcttcacctaaaaataaagttaaaatcttgacagattttttgaataaatgtcgg
gaggttggaaaagaattaaaagatgaaaatcctgatgcggatatttcgctattcccaata
atgagattattattatcaacaaaagaccatgaacgcgggccgtatggtttgaaagaaaaa
tctttgggaattttatatgttagagttttttgccttggtaattctgatgatgctaaacaa
attattaattacagggaaccaacggaacaaaaaacgccatctagcggcgacttggcagga
aaaatctactggatcttgaaacgccgtcagaccaaaaacatctgtaaactatcaatcgag
cagataaattctcttctcgataaaattgcagaaaaaaatcggcagaataaaagcaaagat
cctgagtttattcgtatagcccaacaatgcagcgcattggaaataaaatggctaacgcga
ataattttaaagtccatcagaataggggtaggagaaaagcagatcttaaacgcttaccac
ccagacgcagaatccctcttcggcgagcaatcgaacctccgagaggtctgcgacactcta
cataacctaaaataccgccccaaaaagacttgcaacatctgcgtgctctccccattcaaa
ccgatgctcctcgagcgcttttatatcgagcgtatctccgagctctttaccacaacgcca
tcttacataatccaaacaaaattcgacggcgaaaggagccagctgcacatgtctaacggc
aagtttaagtactacactcgccacggctacgacataaccaaccacccaagtttcggggat
tccccgctttccggtaacctaacctccaaaatatcttcccttctaaacccagaatgccgc
tcaataatcctcgatggcgagcttatgggctggcacaaagaaaaactttgtttcggttct
aaaggtatgaattttgacgttaaaaaactaacctccaaaagcgtccatcagccatgtttg
atggccttcgacataattttatacaacgacaagctattggtcgacttacctttaaaagag
cgattgaaagtcttagagagcgcttttacgccacaagacggcgtcctgatgcgcagtaac
aacactctagtgacttcctctgaccaaatccgcgaaattttcaaccaaagtcttgataat
tacgacgaagggatagtagtaaaagattcgttaggaatctacaagccgaattcccgcgag
ggtaacaagtgctttaaaataaaagcagaatactctgacaatttagtcgaagacatagat
ttactgatagttggaggttattacggacaaggtaagtactcaggaatgtacaacagcttc
ctggtggcgctagtagtccccgggcctagtgaagaaacaaggaagttccaatccgtcgtt
ggagtaagttctgggattccccgggataaacttagagagttaaacgctaaatttgcggag
agttggactaaagagcggccatcttgtgtagtagggcccagtaaggacccaccggactca
tggctgcctccggaaaagtctatagtgctccagatcagagccagtgagttgattaaatgc
aaaactcagcctactaggtatactttgaggtttccgagggtgaagaaggttagggaagac
aaaccttggtacgacgcttgtacgattacggaatttaataacttgataaagcaccgtgga
gtggttaataagctgaccaaaaggcatgctactgaagaagacgaaaaatgtctgcccgcc
aagcggagagacactgaagctaagtttattaagagtgttaagatggatgagaagcacttt
ggggttagggcagctgatgttcagcgcaagacccgactgatggaagggaaggagttctgt
gttatcaacggagatggtaaggtcggtaaggaagatttggaacggattttgctggaacat
tcggccaaagttgttcagaacccgggaagaaatactttttgtgtcttgataggagatgag
aagatattaaaggcaaggaatttgattgagtgcgctaagtatgatgttgccaaaatttca
tggattgctagagcgactaaggaagaaaattggggaaggttggttgagttttttccatgg
gaaatgctggcgatgcgcaaggagactagagacaggttggaggttatgtttgatgagtac
tgggacgggttttttgttgacgtggatttggaaagtctaaagcgctctttggagagagcg
gaggatcttgaagactgtagagagtttgaagaagaagactatagagagttggaagaagag
tgcagggatttggaggttagggtctttgagaatgtggtcggccattttgttgaagatgac
tggttgaagaaaccgtttgtgtttttaagagggaagatttgtgaggagattgatggaaat
actacccatgtttttgtggggggaaattgggacagagagagtgtttataggaaaattaat
cagtccgggaaaaattttattaaggtgatggataaaaagtgggttagagagtgcctggac
agagggcgtttgttaccagaaaatgattatattgtacaataa
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