Corynebacterium glutamicum MB001: cgp_0576
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Entry
cgp_0576 CDS
T02791
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase, beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cgm
Corynebacterium glutamicum MB001
Pathway
cgm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
cgp_0576 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgm03021
]
cgp_0576 (rpoB)
03400 DNA repair and recombination proteins [BR:
cgm03400
]
cgp_0576 (rpoB)
Enzymes [BR:
cgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
cgp_0576 (rpoB)
Transcription machinery [BR:
cgm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
cgp_0576 (rpoB)
DNA repair and recombination proteins [BR:
cgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
cgp_0576 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
AGT04493
LinkDB
All DBs
Position
512873..516370
Genome browser
AA seq
1165 aa
AA seq
DB search
MLEGPILAVSRQTKSVVDIPGAPQRYSFAKVSAPIEVPGLLDLQLDSYSWLIGTPEWRAR
QKEEFGEGARVTSGLENILEELSPIQDYSGNMSLSLSEPRFEDVKNTIDEAKEKDINYAA
PLYVTAEFVNNTTGEIKSQTVFIGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDQTI
DKSTERPLHAVKVIPSRGAWLEFDVDKRDSVGVRIDRKRRQPVTVLLKALGWTTEQITER
FGFSEIMMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNSFFRAKRYDLARV
GRYKINRKLGLGGDHDGLMTLTEEDIATTIEYLVRLHAGERVMTSPNGEEIPVETDDIDH
FGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFG
TSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGP
NIGLIGSLASYARVNPFGFIETPYRRIIDGKLTDQIDYLTADEEDRFVVAQANTHYDEEG
NITDETVTVRLKDGDIAMVGRNAVDYMDVSPRQMVSVGTAMIPFLEHDDANRALMGANMQ
KQAVPLIRAEAPFVGTGMEQRAAYDAGDLVITPVAGVVENVSADFITIMADDGKRETYLL
RKFQRTNQGTSYNQKPLVNLGERVEAGQVIADGPGTFNGEMSLGRNLLVAFMPWEGHNYE
DAIILNQNIVEQDILTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLKDLDDRGIVRI
GADVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRH
FSREDDDDLAPGVNEMIRIYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFLPDGTP
VDIILNTHGVPRRMNIGQVLETHLGWLASAGWSVDPEDPENAELVKTLPADLLEVPAGSL
TATPVFDGASNEELAGLLANSRPNRDGDVMVNADGKATLIDGRSGEPYPYPVSIGYMYML
KLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTI
KSDDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELAGDD
DDFDQAGASLGINLSRDERSDADTA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacccatcttggcagtctcccgccagaccaagtcagtcgtcgatattccc
ggtgcaccgcagcgttattctttcgcgaaggtgtccgcacccattgaggtgcccgggcta
ctagatcttcaactggattcttactcctggctgattggtacgcctgagtggcgtgctcgt
cagaaggaagaattcggcgagggagcccgcgtaaccagcggccttgagaacattctcgag
gagctctccccaatccaggattactctggaaacatgtccctgagcctttcggagccacgc
ttcgaagacgtcaagaacaccattgacgaggcgaaagaaaaggacatcaactacgcggcg
ccactgtatgtgaccgcggagttcgtcaacaacaccaccggtgaaatcaagtctcagact
gtcttcatcggcgatttcccaatgatgacggacaagggaacgttcatcatcaacggaacc
gaacgcgttgtggtcagccagctcgtccgctccccgggcgtgtactttgaccagaccatc
gataagtcaactgagcgtccactgcacgccgtgaaggttattccttcccgtggtgcttgg
cttgagtttgacgtcgataagcgcgattcggttggtgttcgtattgaccgcaagcgtcgc
cagccagtcaccgtactgctgaaggctcttggctggaccactgagcagatcaccgagcgt
ttcggtttctctgaaatcatgatgtccaccctcgagtccgatggtgtagcaaacaccgat
gaggcattgctggagatctaccgcaagcagcgtccaggcgagcagcctacccgcgacctt
gcgcagtccctcctggacaacagcttcttccgtgcaaagcgctacgacctggctcgcgtt
ggtcgttacaagatcaaccgcaagctcggccttggtggcgaccacgatggtttgatgact
cttactgaagaggacatcgcaaccaccatcgagtacctggtgcgtctgcacgcaggtgag
cgcgtcatgacttctccaaatggtgaagagatcccagtcgagaccgatgacatcgaccac
tttggtaaccgtcgtctgcgtaccgttggcgaactgatccagaaccaggtccgtgtcggc
ctgtcccgcatggagcgcgttgttcgtgagcgtatgaccacccaggatgcggagtccatt
actcctacttccttgatcaacgttcgtcctgtctctgcagctatccgtgagttcttcgga
acttcccagctgtctcagttcatggaccagaacaactccctgtctggtttgactcacaag
cgtcgtctgtcggctctgggcccgggtggtctgtcccgtgagcgcgccggcatcgaggtt
cgagacgttcacccatctcactacggccgtatgtgcccaattgagactccggaaggtcca
aacattggcctgatcggttccttggcttcctatgctcgagtgaacccattcggtttcatt
gagaccccataccgtcgcatcatcgacggcaagctgaccgaccagattgactaccttacc
gctgatgaggaagaccgcttcgttgttgcgcaggcaaacacgcactacgacgaagagggc
aacatcaccgatgagaccgtcactgttcgtctgaaggacggcgacatcgccatggttggc
cgcaacgcggttgattacatggacgtttcccctcgtcagatggtttctgttggtaccgcg
atgattccattcctggagcacgacgatgctaaccgtgcactgatgggcgcgaacatgcag
aagcaggctgtgccactgattcgtgccgaggctcctttcgtgggcaccggtatggagcag
cgcgcagcatacgacgccggcgacctggttattaccccagtcgcaggtgtggtggaaaac
gtttcagctgacttcatcaccatcatggctgatgacggcaagcgcgaaacctacctgctg
cgtaagttccagcgcaccaaccagggcaccagctacaaccagaagcctttggttaacttg
ggcgagcgcgttgaagctggccaggttattgctgatggtccaggtaccttcaatggtgaa
atgtcccttggccgtaaccttctggttgcgttcatgccttgggaaggccacaactacgag
gatgcgatcatcctcaaccagaacatcgttgagcaggacatcttgacctcgatccacatc
gaggagcacgagatcgatgcccgcgacactaagcttggcgccgaagaaatcacccgcgac
atccctaatgtgtctgaagaagtcctcaaggacctcgacgaccgcggtattgtccgcatc
ggtgctgatgttcgtgacggcgacatcctggtcggtaaggtcacccctaagggcgagacc
gagctcaccccggaagagcgcttgctgcgcgcaatcttcggtgagaaggcccgcgaagtt
cgcgatacctccatgaaggtgcctcacggtgagaccggcaaggtcatcggcgtgcgtcac
ttctcccgcgaggacgacgacgatctggctcctggcgtcaacgagatgatccgtatctac
gttgctcagaagcgtaagatccaggacggcgataagctcgctggccgccacggtaacaag
ggtgttgtcggtaaaattttgcctcaggaagatatgccattccttccagacggcactcct
gttgacatcatcttgaacacccacggtgttccacgtcgtatgaacattggtcaggttctt
gagacccaccttggctggctggcatctgctggttggtccgtggatcctgaagatcctgag
aacgctgagctcgtcaagactctgcctgcagacctcctcgaggttcctgctggttccttg
actgcaactcctgtgttcgacggtgcgtcaaacgaagagctcgcaggcctgctcgctaat
tcacgtccaaaccgcgacggcgacgtcatggttaacgcggatggtaaagcaacgcttatc
gacggtcgctccggtgagccttacccgtacccggtttccatcggctacatgtacatgctg
aagctgcaccacctcgttgacgagaagatccacgcacgttccactggtccttactccatg
attacccagcagccactgggtggtaaagcacagttcggtggacagcgtttcggcgaaatg
gaggtgtgggcaatgcaggcatacggcgctgcctacacacttcaggagctgctgaccatc
aagtctgatgacgtggttggccgtgtcaaggtctacgaagcaattgtgaagggcgagaac
atcccggatccaggtattcctgagtccttcaaggttctcctcaaggagctccagtccttg
tgcctgaacgtggaggttctctccgcagacggcactccaatggagctcgcgggtgacgac
gacgacttcgatcaggcaggcgcctcacttggcatcaacctgtcccgtgacgagcgttcc
gacgccgacaccgcatag
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