Cottoperca gobio: 115011974
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Entry
115011974 CDS
T07513
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115011974
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115011974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_2
zf-RING_5
zf-RING_10
Prok-RING_4
zf-RING_6
zf-RING_11
Gp58
PilZN
Motif
Other DBs
NCBI-GeneID:
115011974
NCBI-ProteinID:
XP_029293168
UniProt:
A0A6J2Q3Z3
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All DBs
Position
8:783107..786065
Genome browser
AA seq
554 aa
AA seq
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MAQKGVQLDRETLCCSICLDLLKDPVTTPCGHSYCKNCIQRFWDGEDEKRSHSCPQCRQT
FTPRPVLVKNTMLAAVVEELKKTGLQAAPADHCYAGPEDVGCDVCTGRKLKAFKSCVQCV
ASYCEKHLQPHYDVAPLKKHKLVDPSQKLQENMCSRHDEVMKMFCRTDQQCICYLCSVDE
HKGHDTVSAAAERTERQRELEGSRLNIQQRIQDGEKDVKLLQQKVKVINRSADRAVEDSE
KMFTQLIRLMQKRSSDVKQQLRSQQQSEVSRVKELQEKLEQEITELKRKDADLKQLAHTE
DHNQFLHNYPSLSPLSESTLSSSINIPLRYFEEVTAAVSQVTDELQDVLREKWTNISQTG
TEVDVSLSAEPKTRAGFLKYSRDITLDPNTAHTQLLLYVGDRKVTYIRQQQSYSSHTDRF
TGWCLQVLSRESLTGRSYWEVEWSGGVRVAVAYKNISRAGGGECVFGFNDKSWALDCNNK
IYTFCYNKVQTPVSGPASSRLGVYLDHRAGVLSFYSVSDTMTLLHRVHHTFSQPLYAGVR
LYSPGDTAEFCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgggaaaccttgtgttgttccatctgtctggat
ctactgaaggatccggtgacgactccctgtggacacagctactgcaagaactgtattcaa
cgcttctgggatggagaggacgagaagagaagccacagctgccctcagtgcaggcagacc
ttcacaccgaggcctgtcctggtgaagaacaccatgttagcagctgtagtggaggagctg
aagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtg
ggatgtgatgtctgcactgggagaaaactgaaagccttcaagtcctgtgtgcagtgtgtg
gcctcttactgtgagaaacacctccagcctcattatgatgtggctccattaaagaaacac
aagctggtggatccctcccagaagctccaggagaacatgtgctctcgtcacgatgaggtg
atgaagatgttctgccgtactgatcagcagtgtatctgttatctctgctctgtggacgaa
cataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagagagagctc
gaggggagtcgactaaacatccagcagagaatccaggacggagagaaagatgtgaagctg
cttcagcagaaggtgaaggtcatcaatcgctctgctgacagagcagtggaggacagtgag
aagatgttcactcagctgatccgtctcatgcagaaaagaagctctgatgtgaagcagcag
ctcagatcgcagcagcaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcactgagctgaagaggaaagacgctgatctgaagcagctcgcacacacagag
gaccacaaccagtttctacacaactacccctcactgtccccactcagtgagtctacactc
tcctccagcatcaacatccctctcagatactttgaggaagtgacagcggctgtgtcacaa
gtcacagatgaactccaggacgttctgagagagaagtggacaaacatctcacagactggg
actgaagtggatgtttcactgtcagcagaacccaagaccagagctggattcttaaagtat
tcacgtgacatcacactggatccaaacacagcacacacacagctgttattatatgtgggg
gacagaaaagtgacatacattagacaacaacagtcttattctagtcacacagacagattc
actggatggtgtcttcaggtgctgagtagagagagtctgactggacgtagttactgggag
gtggagtggagcgggggagttcgtgtagcagtcgcatacaagaacatcagcagagcaggg
gggggtgaatgtgtatttggattcaatgataaatcctgggcgttagattgtaacaataaa
atatatacattttgttacaacaaagtccaaactcccgtctcaggtcctgcgtcctccaga
ctcggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctctgacacc
atgactctcctgcacagagtccaccacacattctctcagccgctctacgctggagttcgt
ttatattctcctggagacactgctgagttctgtaaactcaagtag
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