Cottoperca gobio: 115016201
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Entry
115016201 CDS
T07513
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cgob
Cottoperca gobio
Pathway
cgob03022
Basal transcription factors
cgob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115016201 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
115016201 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgob03021
]
115016201 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115016201 (gtf2h4)
Transcription machinery [BR:
cgob03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
115016201 (gtf2h4)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
115016201 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
115016201
NCBI-ProteinID:
XP_029299748
Ensembl:
ENSCGOG00000015592
UniProt:
A0A6J2QMX4
LinkDB
All DBs
Position
11:18790675..18799598
Genome browser
AA seq
461 aa
AA seq
DB search
MKLRVQLQCKNLHEYLRELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLP
QAALALWVKIDSQKDHDECVSVLAGLRLWHNQQLQGGLQGYILNPVFKENLRIALLGGGK
SWADEGSTLGPDRHARDIESLDRYAIERWEVILQFMVGSPCAAVSPDLAQLLVQAGLMKS
EAGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMELVEILSFLFQLSFSTLGRD
YSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVTTSSSSTMVSTPGT
GDAGFIVVETNYRIYAYTDSELQIALVALFSEMLYRFPNVVVAHVTRESVQQAIANGITA
QQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQVDFEVL
RDRAQGLGCLVWQDVAHRVMVVSPQGHSEVKRFWKRQKSNT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagctacgtgtccagctgcagtgtaagaatttgcatgaatacctgagagagctgagt
cctgagattttggacagactatacaaccatccagcaacatgtctggctgtctacagggaa
ctcccttctctagccaagaattatgtgatgcgtatgctgttcctggatcagcctctcccc
caggcagcactggctttatgggtgaaaatagacagtcagaaggatcatgatgaatgtgtc
tcggtgttggcaggactccgcctttggcacaatcagcagctgcagggtggcctgcaggga
tacattttaaatccagtgttcaaggagaacctgaggatagctctgctcggcgggggaaaa
tcctgggcagatgagggcagcactctgggtcctgaccgccacgcacgggacatagagagt
cttgaccgctacgccatagagcgctgggaggtcatcctgcagttcatggtgggttctccc
tgtgctgctgtcagtccagacctggctcagctgctcgtccaggcaggcctcatgaaaagt
gaggcgggagaggcgccctacatcacgtctgctggtttccagttcctcctactggacacg
gcctctcagctgtggtacttcaccctgcagtacctcaaaactgctcagtccagagggatg
gagttggtggagatcttgtcattcttattccagctcagcttctcgactctcggcagagat
tactcagtggagggcatgagcgagtcattactcacctttctgcagcacctgcgggagttt
ggactcgtcttccagaggaagaggaagtcgcggcggtactaccccaccagactggccatc
actctggctgcaggagtcacgaccagctcctcctccacaatggtttccacccccggtact
ggagacgcaggcttcattgtggtagaaaccaactaccgtatctacgcctacacagactca
gaacttcagatcgctctggtggctctcttcagtgaaatgctgtatcgcttccccaatgta
gtggttgctcacgtaacaagggagtcagtgcaacaggccatcgccaacggcatcacagca
caacagattattcactttctgaggaccagagcgcatcctgtcatgctcaaacagacccca
gtgctgcctccaaccataacagaccagattagactgtgggagctggagagagatcgactg
cagttcacagagggagtgctctacaaccagttcctctcccaggttgactttgaggtgctg
cgagacagagctcagggtctgggctgtctggtttggcaggacgtggctcacagggtgatg
gtggtgagtccacagggacacagtgaggtcaagaggttctggaaacgacagaagtctaac
acgtaa
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