Cottoperca gobio: 115017297
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Entry
115017297 CDS
T07513
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115017297
Spliceosome [BR:
cgob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115017297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
DUF3182
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
115017297
NCBI-ProteinID:
XP_029301489
Ensembl:
ENSCGOG00000019329
UniProt:
A0A6J2QU57
LinkDB
All DBs
Position
1:complement(11403953..11438769)
Genome browser
AA seq
463 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLIDRDRELDTMVGVHPNAGGPPAVVRGMKRGDPEPDGQTAAAL
VDSTGAECKRPRIDGSGVIGEVGQNNDPLTLGYHGYPSLSQGSQDSAGGQEGLVPPPFSA
FPPPPPPPPQNGLALDYGGSLYAAGAVQGPVEAGGAVNSAANVAISLSVQQSDGSSQIDG
QSVVGSGGVGGGGSIGDDTDAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFN
ERGSKGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMTTPYSNGEGL
ATLPYAGWKLSPMVGAMYSPELYTVPGFPYPAAAAAAAAAAASTAATFRGAHLRGRARPV
YSAVRAAVPQPAIPTYPGVMAYQDGFYGAADLYGGYAAYRYAQPTAVATPAAAAAAAAAA
AYSDSYGRVYTADPYHAALAPAAYGVGAMATLYRGGYSRFAPY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatccatcatgctgcctgtgtcccggggtctcatagac
cgggatagagagctggacaccatggtcggggtgcatcccaacgcgggcggccctcctgct
gttgtccggggcatgaagcgcggagacccagagcccgacggacagacagcggctgctctg
gtggactcgaccggggcggagtgcaagcgtccccggatcgacggctcgggagtgatcggc
gaggttggtcagaacaatgaccctttgacccttggttaccacggctacccgtctcttagt
cagggctctcaggatagtgctggtggtcaggagggactcgtacctccgcctttctccgca
ttccctccacctccaccaccgccaccccagaacggcctagccctggattacgggggcagc
ctgtacgcagcgggggccgtccagggccccgtggaagccggcggagcagtgaacagcgcc
gccaacgttgccatcagcctcagtgtccaacagtcagatgggtcctcccagattgacggt
cagtcagttgttggctcaggaggagtaggtggtggagggagcattggggacgatacagac
gccaaagggaccccaaaacgtctccacgtgtccaacatccccttccgcttccgagaccca
gacctacggcagatgttcgggcaatatgggaaaatcctcgacgtcgagattattttcaac
gagaggggatccaagggctttggttttgttacattcgagacaagtgcagatgcagagagg
gccagagagaagctccacggtacgctggtggaaggacgtaaaatcgaggtgaataatgcc
acagcccgagtgatgacgaacaagaagatgaccaccccttactctaacggagagggcctc
gcaactctgccatacgctggatggaagttgagtcccatggttggagccatgtacagccct
gaactctatacagtaccgggctttccttacccagcagcagcagcagcagcagcagcagca
gctgcctccaccgctgcgacctttcggggcgctcacctccggggtcgcgcccggcccgtc
tacagcgcggtcagggcagctgtgccacaacctgccatccctacctacccgggtgtgatg
gcctatcaggatggcttttacggtgcagctgatctctatggcggctatgcagcgtatcgt
tacgcccagccgactgcggtagcgactcctgcagcagcggcggcggctgcagcagcagca
gcttacagtgacagctacggacgagtttacacggcagacccctaccatgctgcgctcgcc
ccagcggcctacggcgttggagccatggcaacactgtacaggggaggctacagtagattt
gccccttactaa
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