Cottoperca gobio: 115018856
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Entry
115018856 CDS
T07513
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115018856 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgob03041
]
115018856 (ddx46)
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115018856 (ddx46)
Spliceosome [BR:
cgob03041
]
Complex A
U2 snRNP components
U2 related factors
115018856 (ddx46)
Complex B
115018856 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
115018856
NCBI-ProteinID:
XP_029303955
Ensembl:
ENSCGOG00000001693
UniProt:
A0A6J2R3N4
LinkDB
All DBs
Position
14:complement(19008302..19020426)
Genome browser
AA seq
1075 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKKDDRDRNRRERSRSRDRRRSRSRDRKRP
RRSRSRERRRSRSRDRRRSGSRSRARRSRSGSPSKSRRPDEKPRSKEKDNIDPLSDKKKI
KEEKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQGKK
WSLEDDEDDDEDTSAPMDGDDEEEGEGEEGKGEIKEKEIKEEKKEEGEGEKEKEKETPME
EQPPQQPEEEEDDVDPLDAYMEEVKQEVKKFNMGSMKGNDKKGGTMTVTKVMTVVKTKKG
PNTHKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEPVDHGKIQYESYRKN
FYVEVPELARMTSDDVHAYRLELEGITFKGKGCPKPIKTWVQCGVSMKILSAMKRHSYDK
PTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPT
RELALQITKECKKFSKALGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANS
GRVTNLRRATYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRI
LAKPLEVQVGGRSVVCSDVEQHVLVIDEDKKFLKLLEILGHYQEKGSVLIFVDKQEHADA
LLKDLMKASYPCMSLHGGIDQYDRDSVINDFKNGACRLMVATSVAARGLDVKQLILVINY
NCPNHYEDYVHRAGRTGRAGNKGFAYTFITDDQVRYAGDIIRALELSGSPVPPELEKLWV
TFKDQQKAEGKIIKSSSGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIE
EQIESMFNSKKRVKDLSAPGASTGPSGASASTASVPGGLPGIGPTSAGNIQKLEMAKRLA
LKINAQKNLGAEAQDVMQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKL
EEERQAAEQAETVKRYEEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPG
KEPKEGERKIYLAIESANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgaatctagacactacaggaagcgttctgcgtctcggggacggtcaggcagc
cgatcaaagagtcgctccccggacaaacgctccaagaaagacgaccgggaccgaaacagg
agggagagatcacggagccgggaccgccgaaggtcccggtccagagacagaaaacgaccc
aggcgctccaggagtagagagaggaggaggtccagaagccgagacaggaggaggtcgggc
agcaggagccgggcacggaggtcccgatctggtagccccagcaagagcaggaggccagat
gaaaagccaaggagcaaggagaaggacaacattgatcctttatctgacaagaaaaagatt
aaagaggagaaggaggatgagaaggtcgaggatcaagactttgaccagaacaagcttgag
gaggagatgaggaagaggaaggagcgtgtggaaaagtggagggaagagcagaggaagaag
gccatcgaaaacatcggagagatcaagaaagaactggaggagatgaagcagggcaagaag
tggagcctggaggatgacgaggacgatgacgaggatacatcggctccgatggatggagac
gatgaggaagaaggagaaggagaagaaggaaagggggagattaaagagaaagagataaag
gaggagaagaaagaggagggggagggggagaaggagaaggagaaagaaacccccatggag
gagcagccgccgcagcagccggaggaggaggaggacgacgtggatcctctggacgcctac
atggaggaggtgaagcaggaggtgaagaagtttaacatgggatccatgaaaggaaatgat
aagaaagggggcacgatgaccgtaaccaaagtgatgacagttgttaaaaccaagaaagga
cccaacactcacaagaagaagggtgagctgatggagaatgaccaggatgctatggaatac
tcatcagaggaggaggaggtggatctgcagacggctctgacgggcttccagaccaaacag
aggaaagtccttgagcctgttgaccacgggaagatccagtacgagtcgtaccgcaaaaac
ttctacgtggaggtccctgagctcgcccggatgacctcagacgatgtgcacgcgtacagg
ctggaactggaaggcattaccttcaaagggaagggctgccctaaacctatcaagacctgg
gtgcagtgtggagtgtctatgaagatcctcagtgctatgaagaggcacagctacgataag
cccacccccatccaggcccaggccatccctgccatcatgtcgggccgagacctcattggc
atcgctaagaccggcagcgggaaaaccatcgccttcctgctgcccatgttccggcacatc
atggaccagaggcccctggaggagtctgagggaccaatctctgtaatcatgactcccacc
agagagttggctcttcagatcaccaaggagtgcaagaagttctctaaagcgctgggactc
cgggtggtgtgtgtttatggagggacaggcatcagcgaacagatcgctgagctgaagagg
ggagcggagatcatcgtgtgcacaccgggaagaatgattgacatgttgggggccaacagc
ggtcgcgtcaccaacctgcgcagagccacatatgtggtgttggatgaagcagacaggatg
tttgacatgggcttcgagccacaggtgatgcgtattgtggacaacgtgcgtccagaccgt
cagacggtcatgttttcggccaccttccccagagccatggaggcgctggctcgtaggatc
ctggccaagcccctcgaggtccaggtgggcggccgcagtgtcgtctgctctgatgtggaa
caacacgtgctggtgattgatgaggacaaaaagttcctgaagctgctggagattctgggt
cactaccaggagaagggctcggtcctcatctttgtggacaaacaggagcacgcagacgca
ctgctgaaggacctgatgaaagcctcgtacccctgcatgtcactgcacggaggaattgac
cagtacgacagagacagcgtcatcaacgactttaagaacggagcatgtcgtctgatggtg
gccacctctgtggcagccagaggcctggacgtcaagcagctgatcctggtgatcaactac
aactgtcccaaccactacgaggactacgtccacagggccggacgcacaggccgagcaggc
aacaagggcttcgcctacaccttcatcacagatgatcaggttcgttatgctggggacatc
atcagagccttggagctgtccggctctcctgtcccgcctgaactggagaagctttgggtc
accttcaaagaccaacagaaagcggagggtaagatcattaagagcagcagcggcttctca
ggaaaaggcttcaagtttgacgagacagaacacgccttggccaatgagagaaagaagttg
cagaaagctgctcttggactgcaggactctgatgacgaggacggagccctggatattgaa
gagcaaatcgagagcatgttcaactccaagaagagggtgaaggatctgtctgctcccggt
gcgtccaccggtccctcaggagcatctgcctccacagcctctgtccccggagggctgcca
ggcatcggacccacatctgctggaaacatccagaaactggagatggccaagaggctggcg
ctcaagatcaacgctcagaagaacctgggcgccgaggctcaggatgtgatgcagcaggcc
accaacgccatcctgcggggtggcaccatcatgacaccctcagtgtcagccaagaccatc
gcggagcagctggcggagaagatcaacgccaagctgaactacacccccgtggaaaagctg
gaggaggagcggcaggcggctgaacaggccgagactgtcaagagatatgaagaggagctc
gagatcaacgacttccctcagacggccaggtggaaggtgacatctaaagaagctctgcag
aggatcggtgaatactctgaagctgccatcaccatcagaggaacatatttccctccaggc
aaagagccaaaggagggagaacgcaagatctacctggctattgaaagtgcaaatgaactg
gctgtgcagaaagccaaaacggagattacacggttaatcaaggaagagctcatcagatta
caaaattcttaccagccgacaagcaaaggccgatacaaagtgttgtag
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integrated database retrieval system
