Cottoperca gobio: 115019428
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Entry
115019428 CDS
T07513
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115019428
Ubiquitin system [BR:
cgob04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115019428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-RING_6
U-box
zf-RING_5
Y1_Tnp
NgoMIV_restric
FapA
BshC
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
115019428
NCBI-ProteinID:
XP_029304852
UniProt:
A0A6J2R5V1
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Position
14:18859721..18862207
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AA seq
558 aa
AA seq
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MAQQVILDREKLSCSICLDLLKDPVTIPCGHSYCMSCITDCWDEENEKKTHSCPQCRQSF
TPRPVLVKSTMIAELVEDLKKVGLQAASPDLTYAGPGDVACDFCSGMKLKAFKSCLVCMA
SYCEQHLQPHYDGAAFKKHKLVEATSKLQENICSRHDEVMKIFCRTDQQCICYLCSMDDH
KGHDTVSAAAERAERQKELGVSRGKVQQRVQDREKDVKVLQQRVEAINHSADEAVRDSEK
IFTELIHLIKKRSSEVKQQIRSQQKTQVSQAEEFEEKLQQEITELRRKDTELQQLSHTED
HLHFLNNYPSLSRVSESKDLPSIDICPLRSFEDVTAAVSEARDKLQAVLSEEWRHISLAV
TEVDVLMPQAEPRTRAEFMKYSRQITLDPNTAHRCLSLSDRNRKATLMAVEQLYSDHPDR
FDQRRQVLSREGLTGRCYWEVKWSWFVRIAVANKDIRRKGNTEECVFGFNDKSWSLECKR
GSYNFSHNNISTSISGLQSSRVGIYLDHRAGTLSFYNVSETMTLLHRVQTTFTQPLLAGF
WIPSLFGDTAELCELTGV
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcaagtgattctggatcgagaaaaactgagctgttcaatctgtctggatctt
ctaaaggatccggtgactattccctgtgggcacagctactgcatgagctgtattacagac
tgctgggatgaagagaatgagaagaaaacccacagctgccctcagtgcaggcagagcttc
acaccgaggcctgtcctggtgaaaagtacaatgatagcagagttagtggaggacctgaag
aaagtaggacttcaagccgcttcacctgatcttacatatgcaggacctggagacgtggcc
tgtgatttctgctctgggatgaaactgaaagctttcaagtcctgtctggtgtgtatggcc
tcttactgtgagcaacacctgcagcctcactatgatggagctgcattcaagaaacacaag
ctggttgaagccacctcaaagcttcaagagaacatctgctcccgtcatgacgaggtgatg
aagattttctgccgcactgatcagcagtgcatttgttatctttgctccatggatgatcat
aaaggccatgacacagtctccgctgcagcagagagggctgagaggcagaaggagctcggg
gtgagccggggaaaagtccaacagagagtccaggacagagaaaaggacgtcaaggtgctt
caacagagggtggaggctatcaatcattctgctgatgaagcagtgagggacagtgagaag
atcttcactgagttgatccatctcattaagaaaagaagctctgaagtgaagcagcagatc
agatcccagcagaaaactcaagtgagtcaagctgaagagtttgaggagaagctgcagcag
gagatcactgagctgcggaggaaagacactgagcttcaacaactttcacacacagaggat
cacctgcatttcctaaacaactacccctcgctgtcacgtgtgagtgagtctaaagactta
cccagcattgatatctgtcctctgcgctcttttgaggatgtgaccgcggcggtgtcagag
gccagagataaactgcaggctgttctgagtgaggagtggagacacatctcactggcagtg
actgaagtggatgttttaatgcctcaagcagagcccagaaccagagcagaatttatgaaa
tattctcgtcaaatcacactggatccaaatacagcacacaggtgtttgtcattgagtgac
aggaacagaaaagcaacattaatggcagtagaacagttatattcagatcacccagacaga
tttgatcaacggcggcaggttctgagtagagagggtctgactggacgttgttactgggag
gtgaagtggagctggtttgttcgtatagcagttgcaaataaggatattagaagaaaaggg
aacacagaagaatgtgtatttggatttaatgacaaatcttggtcattagaatgtaagagg
ggcagttataacttcagccataacaatatttctacttccatctcagggcttcagtcctcc
agagtaggaatttacctggatcacagggcagggactctctctttctacaacgtctctgaa
accatgactctcctccacagagtccagacaacgttcactcagcctctcttagctggattc
tggattccatcactatttggagacactgctgagttgtgtgagctcacaggagtttaa
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