Cottoperca gobio: 115022975
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Entry
115022975 CDS
T07513
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
cgob
Cottoperca gobio
Pathway
cgob03013
Nucleocytoplasmic transport
cgob03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115022975 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
115022975 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115022975 (thoc1)
03041 Spliceosome [BR:
cgob03041
]
115022975 (thoc1)
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
115022975 (thoc1)
Spliceosome [BR:
cgob03041
]
Complex C
Other components
EJC/TREX
115022975 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
115022975 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
115022975
NCBI-ProteinID:
XP_029309961
Ensembl:
ENSCGOG00000023088
UniProt:
A0A6J2RI94
LinkDB
All DBs
Position
17:complement(8597162..8602373)
Genome browser
AA seq
654 aa
AA seq
DB search
MSPSLFNFVEAKDKFTASARHALVGKTSKPLINAFSQFPGNDAEKKTTFDHALRGVLGDQ
IVEKKVNCDEYLSLIYLSIDAVTEGICSATTPFLLLGDVLDCLPLDQCDKIFSFVEENVS
TWKSNSFYTAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQF
NLENITVFNKNEQESTLGQKHTEEKEDGMEVEEGEMGEDDAPAPCSIPIDYNLYRKFWTL
QDYFRNPVQCYEKLAWMTFLKFSEETLAVFKSYKLDDMQASKRKLEELRASGGEDVYFAK
FLTNEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQTAWIEETTKLV
YQLLKEIPPDGDKFAAMVEHILNTEENWNGWKNEGCASFVKERTVDDKPKRPTRKRQAPE
DFLGKGPDSKIFMGNDELTRLWNLNHDNMEACKSDNREFMPSLDEFFAEAIEQADPANMV
EEEYKAVRNPNYGWRALRLLSRRSPHFFQPTNQKFKSLADYLDSMVSKLAKELPKDIPSE
EIKTGEEDDDDNGDNLLKDSNDSPSIQSKMVTNQQMDDIAAKLGAQWKSLASHLEMKAAE
LREIETDSEDVDMQAKLLLVAWQDREGTQATVECLVTALNAAGFAQIADNLNEA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgtccttattcaattttgtcgaggctaaagacaaatttacggcgtctgccaga
catgccctagttggcaaaaccagcaaacctctgataaatgctttcagtcagttccctggg
aatgatgcagaaaagaagaccacatttgaccatgcgctgaggggtgttcttggtgatcag
attgttgagaagaaagtgaactgtgatgaatacttgtctctcatctacctgagtattgat
gcagttacagaaggtatctgttctgctacaactcctttccttctgctaggagatgtactg
gactgtcttcctcttgaccaatgtgacaaaatattctcttttgtcgaggagaatgtttcc
acctggaaatcgaactctttttacactgccgggaagaactacttgttgaggatgtgtaat
gatcttttacggaggctgtccaaatcccagaatactgtgttctgtgggcgaatccagctt
ttcctggcacgtctcttccctctgtctgagaaatcaggtctcaatctgcagagtcagttc
aatctggaaaacataacggtgttcaacaaaaatgaacaagaaagcactctcggccagaag
cacacagaagaaaaggaagatggcatggaggtggaggaaggtgaaatgggcgaggatgat
gctcctgcaccatgctccattccaattgactacaacttgtacagaaagttctggacactg
caggactacttcagaaaccctgtgcagtgttacgaaaaattagcttggatgacattcctg
aagttctcagaagagaccttggcagtgttcaagagctataaattggatgacatgcaagcg
tctaagagaaagctggaagagctgagagcatctggaggagaagatgtctactttgccaag
tttctaacgaatgagaagctgatggacttgcagctcagcgacagcaacttcaggcggcac
attctactgcagtacctcatcctcttccagtacctgaagggtcaggtcaagttcaagagc
tccagctgtgttctgaatgatgaccagaccgcgtggattgaagagacgactaaactggtt
taccagctgctgaaagagatccctcccgatggagacaagtttgccgccatggttgagcac
atcttaaacacggaggagaactggaatggctggaaaaatgagggctgcgcaagctttgtg
aaagaaaggacggtagatgacaaacccaaaagacccaccaggaaaagacaagccccagaa
gacttccttggaaaagggccggactccaagattttcatgggaaatgatgagttgactcga
ctgtggaacctgaaccatgacaacatggaggcctgcaagtcagacaacagggagttcatg
ccatcattggacgaattctttgcggaggccattgaacaggccgaccctgcgaacatggtg
gaggaagagtataaggccgttcggaacccaaactacggctggcgcgctctgaggctgctg
tccaggagaagtccacacttctttcaaccaactaaccagaagttcaaaagcctggcagac
tacctcgacagcatggtcagcaaactggccaaagaactgccgaaggatattccctctgaa
gagatcaagacaggagaggaggatgacgacgataatggagacaatcttctcaaagacagc
aatgacagtccgagcatacagagcaagatggtgacaaaccagcagatggatgacatagca
gccaaactgggggctcagtggaaatcgctggcgtctcatttggagatgaaggcggcggag
ttgcgagagatcgagacagacagtgaagatgttgacatgcaggctaaactgctgcttgta
gcctggcaggatagagagggaacacaagctacagtggagtgcctggtcacagctcttaat
gctgcaggattcgcccagattgcagacaacctcaatgaggcttaa
DBGET
integrated database retrieval system
