Cottoperca gobio: 115023529
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Entry
115023529 CDS
T07513
Symbol
tp53bp1
Name
(RefSeq) LOW QUALITY PROTEIN: TP53-binding protein 1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
cgob
Cottoperca gobio
Pathway
cgob04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115023529 (tp53bp1)
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Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
RTT107_BRCT_5
Tudor_5
DUF4537
Motif
Other DBs
NCBI-GeneID:
115023529
NCBI-ProteinID:
XP_029310434
Ensembl:
ENSCGOG00000012446
UniProt:
A0A6J2RKE1
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All DBs
Position
3:7686346..7709426
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AA seq
1724 aa
AA seq
DB search
MDPGGSELDSSLPQPENPCLIVEDSQPDSVALEDDPESSYRALLARRLSSLQPTSRSPVL
ELISSPLGSRCSQTDSQSESSQSNNLAEPGVLMAANPSSAFQEESQVLNICPPNNKKKCA
PEDTDIGSGADSTTHCIQSEEGNTQLGFLELSQSQDLRGEVVNRQEEDADIVPQSDSERR
TKSAEQNISSRTSESQDNKAVRSEVSSSCSLVSSAQSGRQLGIEALLYSEGHQASDEQDS
QILSSQEDMFDTDKTGAAVDSTVSEPEQQGQPTATPSHTLRLLHLSGQGTLVQETLSQSS
VDYVAPTQDNLTNTPLIVPSSPTNSEDIHSADEPMDTSLPPEDQAEPMETEVGSKPHPSA
STPVSQNSPGFVLERTLSLPSQPELSHDVFVPTQSLEAPQQSDKKTAALPRETQSQHLET
APFTLPLQLSVNTQSSSPAQKTSELTEEDSQATQIEELEEPPGVDASDSHKRRESNGVSS
DSQAASSSKASTSAVSPKHRSECSKNELSSLSQRSEVDKKTATSLNVQNVNVKDKSDSKE
TSSVDMDPSDLTVNSSVQETPPADTTPCSLPSQSMISQTSAVDVVEGSVNLKKEGATAKS
PSVKSSSQKCGAVGNCQTVKDVVDEHKKGEVEGEEVMEEEEGESTMGGGASGIDLVLSQS
ELLSPQPMEEESEDRGEDSIIVVTDSERDSQVLRKDVTPQSKTNSSQPIRGKVSFSTNGH
GSQAQGKTVHPAPDRLSQGERAGPEPEGLKDKSLSDSSGEISFHFTLPKEGDLIGPVVGA
TPPLINQLKQTLRHSTPIEITSFSEKLGVVGDVSADGAMAASDIVSGESGDDTTEKGDGK
LSLRMKLVTPVEEGSSERFSLQKPALSEEEGSVVKVTTVAKAVTSPSVFSRVRQVHRQQE
AREESQGGGNTTPVRGELFASPQRGSPASSLGCNSLPNSQSEPSQKEVLAATQETHKDLS
GSDMRSEDRREPPQAPEPPTPNRKDARQRVPFDNTITSSPSNKLRQRTVSQQTSFDAPGL
RSPAGRGEPESPSFRRTAAPAHRRHVRTIQEVRTTVTRIITDVYYEDGKEVDRKVTEENE
EPVVDCQVLDGDISPCRTGSSSMTSGDLGDISSLSSKTSSLQHSSGGTSSSGFTRPDFIM
PPSRGYFSPRRGGRQQQRGHRGQRAGSVVTMNRGFIPLSPRGRARRGRPPSRSSMSRGRG
VGSLQRLGAHGQPHSSSEDEPYTRMLPPRLPVSPTDAELHSRSDSLRSSPEATNSTGSSF
IGLRVVAKWSSNGYFYSGCIIKDAGEGNFRLRFDDGYECEVAGKDILLCDPIPLETEVTA
LLEDEYFSIGVVRGHKTEGQEMFYSVEKDGQRQWHNRTAVILSLEQGNKLREQHSLGPYE
PSTPLTKASDISLDNLVEGKRRRRGAPEDQNTPNRSSSNSPRTPGTSGKRKLMTSEEGRT
TAKRGRRGPGARAAQRVGVCNTSGSGTDLPAPSCDVAETHGPLPQNTTLFMGFAFMLTAS
SEIDRLTNKHASDDEDDYVQSAPYNKAYTESQLQAGGGFVLPDFNEEQCKAAYQSLLISD
QHCRTRKYLLCLASGVPCVSHVWVRDCCKENKLLNYRNYLLPAGEGPDEAVVEWHSRCSP
FKTLRVLLVFEKPVELWAQLITMGGGSSVQQFQPENDGSDIPAGKYDVVVTDGACPPLVE
KNVTSQEVPLVSPEWLIQSVIRGERLGFHSKPQYRHDYSSSSSS
NT seq
5175 nt
NT seq
+upstream
nt +downstream
nt
atggatcccggaggaagtgaactggactccagcctgcctcagcccgagaacccgtgtctg
atcgtggaggactcgcagccggacagtgttgctctggaggacgacccagagagcagctac
cgagctctgctggcccggcgcctgtccagcctgcagcccacctcccgcagcccggttctg
gaactgatatcctcgccgctaggaagcagatgctctcagaccgacagccaatcagagagt
tcccagagtaacaacctagctgaacccggcgttctcatggcagccaaccccagttctgca
ttccaggaggaaagtcaagttctaaacatttgccctccaaacaacaagaaaaagtgtgca
ccagaggacaccgatattggttctggagctgattctaccacacactgcattcagtctgag
gagggaaacactcaattgggttttctcgagctttctcagagtcaggatctgcgtggtgaa
gttgtgaaccgtcaggaggaagacgccgacatcgtacctcagtcagacagcgagagacgc
acaaaatcagcagagcagaacatcagctccaggacttcagagagtcaggacaacaaagca
gtgagatctgaggtgagctccagctgctcattggtgtcttcggctcagtcggggaggcag
ctgggcatcgaggctctgctgtactcagaggggcaccaggcgtccgatgagcaggacagt
cagatcctgtcctcacaggaggacatgttcgacactgataagacaggtgctgcagtggac
agcaccgtgtctgagccggagcagcagggtcaacccaccgcgacaccatcccacaccctg
cgactgctgcatctgtctgggcagggaacactggtgcaggaaactctgtcccagagctct
gttgactatgttgcccccacgcaagacaacttaaccaacacccctttaatagttcccagc
tcaccaaccaattcagaggatatacacagtgctgatgaaccgatggatacttccctgccc
ccagaagaccaagcagagccaatggaaacggaggtcggctctaagccacacccatccgcc
tctactcctgtctcccagaactcccctggctttgtgttagagcgaactctctctttaccc
tcccagccagagttatctcatgacgtgtttgtcccaacgcagagcctggaggcaccacag
cagtcagataagaagacggcagcattgcctcgcgagacacagtcgcaacacctggagacg
gctcctttcactttgcctttgcaactctctgtgaacactcagagcagtagcccagctcag
aagacctcagaacttactgaggaggacagccaggccacgcagatagaggaactggaggag
ccgcccggcgtcgacgccagcgactcacataagaggagagagagcaacggggtgtcttca
gattcacaagctgcctccagctccaaagcttcaacctctgctgtatcaccaaagcatcgc
agcgaatgttcaaagaacgaactgtccagtctgtcgcaaagatctgaagtggacaaaaag
acagcaacttctttgaatgtacaaaatgtgaatgtaaaagacaagagtgacagcaaagag
acgagctctgttgacatggatccctctgatctgactgttaacagcagcgtgcaggagact
ccccccgcagacactactccctgcagtttgccctcacagtctatgatctcgcagacatct
gctgtggatgtggtggagggttctgtaaacttgaagaaggaaggagcaactgcaaagagt
ccgtctgtaaaatcgtcgtcacagaagtgtggagcggttggtaactgtcaaacggtcaaa
gacgtggtggatgagcataagaagggtgaagtagaaggggaggaggtgatggaggaggag
gagggggagagcacaatgggaggcggggcgtcaggaatagatctggttctctcccagagc
gagctgttgtctcctcagcccatggaggaggagagtgaagaccgaggagaggacagcatc
atcgttgttacagacagcgagagagactcccaggtcctccggaaagatgtgacgccccag
tcaaagacaaacagttcccagccaatccgaggcaaagtgtccttctccactaatggacat
gggtcccaggctcaggggaagacggtgcatccggctcctgataggctctcccagggggag
agggcggggcctgaaccagaggggctcaaagacaagagcctgagcgatagctcgggagaa
atttccttccacttcacacttcctaaagaaggggatctgattggtcctgttgttggtgcc
acgccccctctaatcaaccagctgaagcagacgctgaggcacagcactcccatcgagatc
acttccttttctgaaaagttaggcgtggtgggggatgtctctgcagacggggcaatggca
gccagtgacatcgtttcgggggaaagcggggatgacacgacggaaaagggagacggaaag
ctgagtttaaggatgaagctggtgacccctgtcgaagagggcagctcggagcgcttcagc
ctgcagaagccagcactatcagaggaggaggggtctgtcgtcaaggttaccactgttgcc
aaggctgttaccagcccgtcagtgttcagtcgtgtccggcaggtgcacagacagcaggag
gcaagggaggagagccagggtggaggcaacaccacacctgtcagaggggagctgttcgcc
tcaccgcagagaggctccccggcgtcctcgctgggatgcaacagcctccctaacagccaa
tcagagccttcgcaaaaggaagtgttggcagcaacgcaggagactcacaaggatctttcc
ggctccgacatgcggtctgaggatagacgagaaccgcctcaagctccagagccgcccacc
ccgaacaggaaagatgcccgacagagggttcccttcgacaacaccatcacctccagtccg
tccaataagctccgtcagcgaacagtctcccagcagaccagcttcgatgcaccggggctg
cgctccccagctggcaggggtgaaccagaatctccgtcctttagaagaaccgcggctccc
gcccaccgcagacacgtgcgcaccatccaggaagtgcggaccaccgtcacacggatcatc
acagacgtgtattatgaggacggcaaagaggtggaccgcaaagtcacagaggagaacgag
gagccagtggtggactgccaggtgttggacggcgacatctccccgtgccgcacaggcagc
agctctatgacctctggtgaccttggtgacataagctctctgtcgtcaaagacctccagc
ctgcagcacagctccggaggaaccagcagcagcggcttcacccggccggacttcatcatg
ccgcccagtcgagggtacttcagtcccaggaggggaggcaggcagcaacagaggggtcac
cggggtcaacgggcagggtcagtggtcacaatgaacagaggcttcatcccgctgtccccc
agaggaagggctagaaggggccgacccccatcccgctcctcaatgtccaggggacgtggt
gttggctcactgcagcggctcggtgctcacggccagccacactcctcctcagaggacgag
ccctacacccgcatgctccccccacgcctccccgtcagccccacagatgccgagctccac
agccgctccgactccctcaggtcatcgccggaggcgacgaactcgaccggaagcagcttc
atcggcctgcgggtggtggccaagtggtcgtccaacggctacttttactcaggttgcatc
atcaaagacgccggtgaggggaatttccgcctacggtttgatgacggctacgagtgtgag
gtggcggggaaggacatcctgctgtgtgatcccatccccctggagacggaggtcaccgct
ctgctggaggacgagtacttcagcataggtgttgtgaggggccataaaacagaagggcag
gagatgttctacagtgtggagaaggacggccagaggcagtggcacaacaggaccgccgtc
atcctgtctctggagcagggaaacaagctgagggagcagcacagcctcgggccctacgag
ccctccacgccgctgaccaaggcctccgacatcagcctcgataacctggtggaggggaag
aggaggcgcagaggagcccccgaggatcagaacacacccaaccgcagctcttccaacagc
ccccgaacccccggcacctccggcaagagaaagctgatgacctccgaggagggcaggact
acggccaagagaggccgcaggggcccgggcgccagagccgctcagcgtgtcggagtgtgt
aacacctctggcagcggcacagatctccccgctccgtcttgtgatgttgcggagactcac
ggcccgctgccccagaacacgactctctttatgggctttgccttcatgctgacggcctcg
tcagagatcgaccggctgaccaacaagcacgccagcgatgacgaggatgattacgtgcag
tcagctccgtataacaaagcttacacagagtcccagctgcaggcgggtggaggctttgtc
ctgccagacttcaatgaagaacaatgtaaggcagcttaccagagcctgctcatttcagac
cagcactgtcgtacaaggaaatacttgctgtgtttggccagcggtgtgccgtgtgtgtca
cacgtctgggtgcgagactgctgcaaagagaacaagctgctcaactacaggaactacctg
ctgcctgccggggaggggccagatgaggctgtagtagaatggcattcacgctgcagcccg
ttcaagactctgcgggtccttctcgtgtttgagaagccggtggagctttgggcacagctg
atcaccatgggtggaggttcttctgtccagcagttccagccagaaaatgacggctcagac
attcctgctggcaagtatgatgtcgtggtgacagacggtgcctgtccgccattggtggag
aaaaatgtgacatcacaggaagtcccgcttgtgtctcctgagtggcttatccagagtgtc
atccgtggggagcgcctgggtttccatagcaagcctcagtatcgccatgactactcctcc
tcatcatcatcataa
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