Cottoperca gobio: 115027249
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Entry
115027249 CDS
T07513
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47 isoform X1
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cgob
Cottoperca gobio
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgob01002
]
115027249 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115027249 (usp47)
Enzymes [BR:
cgob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115027249 (usp47)
Peptidases and inhibitors [BR:
cgob01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115027249 (usp47)
Ubiquitin system [BR:
cgob04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115027249 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Motif
Other DBs
NCBI-GeneID:
115027249
NCBI-ProteinID:
XP_029316316
Ensembl:
ENSCGOG00000021289
UniProt:
A0A6J2S157
LinkDB
All DBs
Position
3:complement(19700451..19720174)
Genome browser
AA seq
1367 aa
AA seq
DB search
MEMVPSEENQFVPKEIQNAAEEPRVLCIIQDITSAKTVNERLTINLPASTTLSKLYGDVA
HKAGYVKATFDLAWGNTPDMAPLDHSSEMSLSDSGFEPGGKRNFLQLTDKDGEQPQIASD
ESGTADSSGLDDSSQERFIGPLPRDGTAGCSGDYSSPSYTYSSILNKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRKALYNWEFEEVEEDPVTSIPYQLQRLFVLLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGASQAYGSVEEALHAFIQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMAFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSAEKVLKPKNTLTFELFSVMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITPDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYLAAEDFPEHITSLVQKEKETEEQEKRQREIERNTCKIKLFCTRPVK
MMTESKLEVHKDKTLREATEMAFKLMELEGVVSLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLEIRKPEQVFQPYKPGEVMVKVHIVDLKSDAIATPVSVRAYLN
QTITEFKQLIAQTTGLSAESMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSEL
TDHQVAFTDSHLWKLLDRHGNTIRLSVLLPEQSPGTLANRTLCQKVGGDSDVPLEGSEGN
TKLVEAILEESTEKLKNLSLLQQQQQHGSSTSDSQKSSDGSDFEHIESPSQGADSNSSLC
VAADNRELENRIRATAGGSSGASSDPDNHFASEERSDSEVNNDRSTSSVDSDILSSSHSS
DTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKDTWDTAEEDSGTDSEYDDNGKSKAE
AQYLYFRAEPCSQDDSSSDAQKCLVVHVDKRITLAAFKQNLEPYVGVASTQFKVFRVYAN
NQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFLVDTVFAK
GMTVRRSKEELLPLLKEQCKLDLSLDSVRLRKKTWKNPGTVFLDYHVYEEDISISSNWEV
FLEVLNEPEKMKSMSQLAVLSRRWSPATMKLGPFKEVILESSSVEELKEKLSEMSIIPLE
NLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAVVFYRDSTEEPLVLS
DEERSDLMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQD
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgcctagcgaggagaaccagttcgtacccaaagagatccaaaatgcagct
gaggagcccagagtgctgtgtatcattcaggacatcaccagtgcaaagacggtcaatgag
aggctgaccatcaacctgcccgcttccaccaccctctccaaactctatggagatgttgcc
cacaaagcgggatatgtgaaagccacttttgaccttgcctggggaaatacgccggacatg
gcaccactggaccacagcagtgagatgtccctctcagattctgggtttgagcctggtggt
aagaggaatttcctccagctcactgacaaagatggcgagcagccccagatagcatcggat
gagtcaggaacagcagatagcagcgggctggatgacagctcccaggagcgattcatcggg
cccctaccgagggacggcactgcaggctgcagtggtgactacagcagtccatcttacacc
tactcgtccatcctcaacaaatctgaaacgggttacgtgggcttggtcaaccaagctatg
acctgctatttgaacagtcttctacaaacgctgttcatgaccccggagttcagaaaggct
ctctacaactgggagtttgaggaggttgaagaggatccagtcaccagtataccctaccag
ctgcaaaggctgtttgtcctgctgcagactagtaagaaacgggcgatcgagaccaccgac
gtgactcggagctttggctgggacagcagcgaggcttggcagcagcatgatgttcaagag
ctgtgcagagtcatgtttgatgccctggagcaaaagtggaagcagacagagcaggctgac
ctgatcaaccagctgtaccaggggaagctgaaggattatgtgcgttgtctggagtgtggc
tatgagagctggaggattgatacttacctggacatccctcttgtgatcagacccttcgga
gccagccaggcctatggcagtgtggaagaagctttgcacgcatttatccaaccagaaact
ctggatggacccaaccagtacttctgtgaacgctgcaaaaagaaatgtgacgcccggaag
ggtctaagatttctgcacttcccctacctgctgacgctacagctgaagcgctttgacttc
gactacaccactatgcatcgcatcaagcttaacgaccgcatggctttccctgaggagctc
gacatgagtccattcatcgatgtggaagatgagaagtcgcctcagacagagagctgcact
gacagcggagcagagaatgaaggcagttgccacagcgaccagatgagcaacgatttttcc
accgatgattgtgtagatgagggcatctgcttggacagcaccggcagcgcagagaaggtg
ttgaagccaaagaacacgctgacctttgagctgttctccgtcatggtccattctggcagc
gctgcaggcggccactactacgcctgcatcaaatcctttagtgatggccagtggtacagt
ttcaatgatcagcacgttagcaagatcaccccagatgatatcaggaagacatatgggggc
tcctcagggagcagaggctattactccagtgcctttgcaagctctacaaatgcatatatg
ctgatttatagattgaaagatccctcaaggaatgcaaagtatttagcagcggaagacttc
ccggagcacataacgagtttggttcagaaggagaaagagactgaagagcaggaaaagcgt
cagagggagattgagcgcaacacttgcaagataaagcttttctgcacgcgtcccgtaaag
atgatgacggagagcaagctggaagtacacaaggacaaaactctcagagaagcaacagaa
atggccttcaagctgatggagctggagggagtggtgtctctggactgctgccgcttggta
aagtacgatgagttccatgagtacctggagcgctcctacgaaggggaggaggacacaccg
atgggcctactgctgggaggagtcaagtcctcatatatgttcgacctgctgctggagatc
cgcaaaccagagcaagtgttccagccttacaaacctggagaggtgatggtgaaggttcac
attgtggatctgaagagtgatgccatcgccactccagtcagtgttcgggcgtacttaaac
cagaccatcactgaattcaaacaactcattgcacagactacagggctatctgcggaaagc
atgcgcgtggtcctggagcgctgctacaatgacctccggctcctgtatgtcccaaacaag
acactgaaagctgaagggttcttcaggagtaacaaggtgttcgtagagagctccgagttg
acagatcatcaggttgctttcactgactcacacttgtggaaactgttggatcgtcacggg
aatacgatccggctctcggttttactgcctgagcagtctcctggtaccttggccaacagg
actctttgccaaaaagtaggaggtgactctgatgtgccccttgaaggttcagagggtaac
acgaaattggtggaggcaatcctagaggagagcactgaaaagttaaagaatctgtctctg
ctgcagcagcagcagcagcacggctccagcaccagtgacagccagaaaagctctgacggc
agcgactttgaacatatcgaatccccaagtcaaggggctgactcaaactcttcactctgt
gtggctgcagacaacagagagttagaaaaccggatcagggccacagctgggggcagcagc
ggcgcctcctctgaccccgacaaccactttgcctctgaggagcgctctgactctgaggtg
aacaatgaccgcagcaccagctcagtggacagcgacatcctgagctccagccacagcagt
gacacactgtgcaatgcagacagcgggcccatacagctggccaacggcttggactcgcac
agcatcacaagtagtcgtcgctccaaagcccacgagggcaaaaaagacacctgggacact
gctgaagaagactctggaacagacagcgagtatgacgacaatgggaagagcaaggcagag
gctcagtacctatacttcagagcagagccttgttctcaagatgactcctcgtcggatgca
cagaaatgtttagtggttcacgtggacaagagaataacattagcagcatttaaacagaac
ctggagccctacgtgggagtcgcctccacccagttcaaggtgtttcgggtgtacgccaac
aaccaggagtttgagagtgtacgcctcaatgaaacgctctcatcgttctctgacgataac
aagataactattcgactaggaagagcactgaaaaaaggtgaataccgagtgaaagtgtat
cagctactagtgaatgaaccagagccctgcaagttcctcgtggacacggtgtttgccaag
ggcatgactgtcagacggtctaaagaggagctgctgcctctgttgaaagagcagtgcaag
cttgacctcagccttgacagtgttcgtctcaggaaaaagacgtggaagaacccaggcacg
gtgtttctggactaccatgtctatgaagaagacatcagcatctcttccaattgggaggtt
ttcctggaagtactcaacgaaccggagaagatgaagtccatgtcgcagctggccgtcctg
agccggagatggagccccgctacaatgaagctggggccctttaaggaagttattctggag
agcagcagtgtagaagaactcaaggaaaagctcagtgaaatgagcattattcctctcgag
aacctggagtttgcgaagggtagaggaacatttccttgtgatatatccgtgttggagatc
catcaggatttggactggaaccctaaggtgtcgactctgaacgtgtggcctctgtacatc
tgtgacgacggagccgtggtcttctacagggacagcacagaagaacctctggtgctgtcg
gacgaggagcgcagtgatttgatgaagaaggagagcagccgtctgctcaagactggacat
cgcgtcagctactcgccgcgcaaggaaaaggccctgaagatctacctggacggaggccca
gccaaggacccggggcaggactga
DBGET
integrated database retrieval system
