Corynebacterium glutamicum AR1: CGLAR1_06370
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Entry
CGLAR1_06370 CDS
T03362
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cgq
Corynebacterium glutamicum AR1
Pathway
cgq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGLAR1_06370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgq03021
]
CGLAR1_06370
03019 Messenger RNA biogenesis [BR:
cgq03019
]
CGLAR1_06370
Transcription machinery [BR:
cgq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CGLAR1_06370
Messenger RNA biogenesis [BR:
cgq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CGLAR1_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIK84887
LinkDB
All DBs
Position
1319389..1321689
Genome browser
AA seq
766 aa
AA seq
DB search
MTTTDNTAANQGELTALRLPDLRKIAADLGLKGTSALRKGDLINAISAAREGKPTAAAKK
TSPRKAPSHTRATQPSAPVEQAQEAPAQTSTAPASAPSEETPAAPARRGRRRVTTTATTP
EPAAPAQSQPAEAQPAQTQAAQQEELPVAAKESAPATENTQGQSQGQAQGDEHDDRFESR
SAARRARRNRQRQIHRDGDDNANANTESEQNTPAQNATAQAESEQTAAPAQAEAAEQNQN
DNSESSENRSDNYRNNNRRSRNNRNNRNYRDNNESSDNAGQSSNDDADNNQAQSEDNNDD
RRSRNNRNNDRNDRNDRNDRDNHNDDNDDRRNRRGRRNRRGRNDRNDRDNRDNRDNRDNR
DNRDNSNDGDNNQQDELQQVAGILDIVDHNVAFVRTTGYHAAPSDVFVSNQLIRRMGLRS
GDAIEGQVRMNQGGGNHNNHGRNRQKYNNLVRVEMVNGLPAEETRNRPEFGKLTPLYPNQ
RLRLETEQKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAISTNNPECYLMV
VLVDERPEEVTDMQRSVNGEVISSTFDRPPSEHTAVAELAIERAKRLVEQGQDVVVLLDS
ITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTIIATAMVETGSA
GDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLNPDEARIMHKLRRI
LSALDNQQAIDLLIKQLKKTKSNAEFLMQVASSAPMAGTEKEEDYS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaccacagacaacaccgcagcgaatcagggtgaactgaccgccctccgactgccg
gatctgcgcaaaattgccgccgaccttgggctcaagggaacctcggcattgcgtaagggc
gatctgatcaacgccatctctgcagcccgcgagggtaagccaaccgcagctgcgaagaag
acttccccacgcaaggccccatcacacacccgtgcgacacagccttccgctccggttgag
caagcacaagaagctcccgcgcaaacttcaactgcacctgcttcagcaccatctgaagag
actcccgcagctcccgctcgtcgtggacgtcgccgtgtaaccaccaccgcgaccacccca
gagccagcagcgcctgcacaatcccagcctgcagaagctcaaccagcacagactcaggct
gcacagcaagaagaacttcctgttgcagcgaaggagtccgcaccagctacagaaaacact
cagggccaatcccagggccaagctcagggcgatgagcacgatgatcgctttgagtcccgt
tctgctgcacgccgagcacgccgcaaccgtcagcgccagatccaccgcgatggcgatgac
aatgcgaatgcaaacacagagtctgagcagaacacccctgcccagaacgcaaccgcacag
gctgagtctgagcagactgcagctcctgcacaggctgaagcagctgagcagaaccagaac
gataacagcgagtcctccgagaaccgcagcgataactaccgcaacaacaatcgtcgttcc
cgcaacaaccggaacaatcgcaattaccgcgataacaacgagtcctctgataatgcagga
cagtccagcaatgatgatgccgacaacaatcaggcacagtctgaggacaataacgacgat
cgccgttctcgtaataaccgtaacaacgaccgcaatgatcgtaacgatcgcaatgaccgc
gacaaccacaacgacgacaacgatgatcgccgcaaccgtcgcggacgccgcaaccgccgt
ggacgcaacgaccgtaacgatcgcgacaaccgagataaccgggataaccgggataaccgg
gataaccgcgacaacagcaacgatggcgacaacaaccagcaagatgagctgcagcaggta
gcaggcatcctggacatcgtggaccataacgtcgcattcgtgcgcaccaccggttaccac
gctgcaccttctgacgtgtttgtcagcaaccagctgatccgccgtatgggtcttcgttcc
ggtgatgccattgaaggtcaggttcgtatgaaccagggtggtggcaaccacaacaaccat
ggtcgcaaccgtcagaagtacaacaacttggtgcgcgtggagatggttaacggtcttcct
gctgaagagactcgcaaccgtcctgagttcggcaagctgactcctctgtacccgaaccag
cgtctgcgtttggaaactgagcagaagattcttaccactcgtgtgatcgacttgatcatg
cctattggtaagggacagcgtgctttgattgtgtcgccacctaaggctggtaagaccacg
atcctgcagaacattgcgaacgctatttccaccaacaacccagagtgctacctcatggtt
gttttggttgatgagcgtccggaagaagttactgatatgcagcgctccgtcaacggcgaa
gtgatttcttctactttcgatcgtccaccatcagagcacactgcggttgctgagctggcg
attgagcgtgcgaagcgcctggtggagcagggccaggacgtcgttgttctgcttgactcc
attactcgtttgggccgtgcgtacaacaacagctcacctgcatcgggacgtattttgtcc
ggtggtgtggattccaatgcactgtacccgccgaagcgtttcttgggtgctgctcgaaac
atcgaaaatggtggatctttgaccatcatcgcaactgccatggtggaaaccggctctgct
ggtgacaccgtgatcttcgaggagttcaagggcactggtaacgctgagctgaagctggat
cgtaagatctctgagcgccgcgttttcccagctgtggatgttaatccttctggtactcgt
aaggacgagctgttgctcaacccggacgaggctcgcattatgcacaagctgcgtcgtatt
ctgtctgcacttgataatcagcaagccattgatctgttgatcaagcagctgaagaagacc
aagtccaatgcggaattcctcatgcaggttgcttccagcgctccaatggcaggcacagaa
aaagaggaggattactcctaa
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