Nakaseomyces glabratus: CAGL0J06842g
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Entry
CAGL0J06842g CDS
T01024
Name
(RefSeq) uncharacterized protein
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03022
Basal transcription factors
cgr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CAGL0J06842g
09124 Replication and repair
03420 Nucleotide excision repair
CAGL0J06842g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgr03021
]
CAGL0J06842g
03400 DNA repair and recombination proteins [BR:
cgr03400
]
CAGL0J06842g
Transcription machinery [BR:
cgr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CAGL0J06842g
DNA repair and recombination proteins [BR:
cgr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CAGL0J06842g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
2889621
NCBI-ProteinID:
XP_448003
UniProt:
Q6FP41
LinkDB
All DBs
Position
J:complement(657226..658740)
Genome browser
AA seq
504 aa
AA seq
DB search
MSFSGLKHSITQYLEEIPSQVQTRLYKSPATCLAIYRLLPTLAKFFIMTVIFNDKDISLR
DLDRWVKSNGKLQFQEAIKSMKSLHLLIPTRVNGQLLINLNPTFRESFRNALTGGEVNNS
FGIVVDEDRLDTVVNLAVLDEYAATKWETILHFMVGTPMAKMPSENVLNLLKHSKLMEEV
PDSSEFMITNEGFQFLLQEVNSQIWSLLLQYLKLAESLHMDPVHVLNFIFMLGALETGKA
YSTENLSETQLKMLLDMRDYGLVFQKTSNPNIFYPTRLAQMLTSDTKSMRTASGAMESVL
NKPDDAAKSTDDKYDSLEGKAEDIQDGALIIETNFKLYSYCNSPLQIAILSLFVHLKSRF
ANMVAGQITRESIRRALINGITADQVIAYLESHAHPQMRRLAEEKLQKKLELDPNCKDPL
QVLPPTVVDQIKLWQLELDRVLTYEGSLYIDFDTAQDFNMLCKYAQDIGALLWKDDRKRK
LFVSREGNAQVLEYAKRKIKKKEE
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcagtggtctcaagcactcgattacacagtacttggaagagataccaagccaa
gtgcaaacaagactgtataaatccccggctacatgcttggctatttacagacttctgccg
acactggcaaagtttttcataatgacagttatattcaatgataaagatatatcattacgt
gacctggatcgttgggttaaatcgaacggcaagctacaatttcaagaggctatcaagtca
atgaaatctttacatttgctgataccgacaagggtaaatgggcaacttttaatcaacttg
aatccaacatttagagaaagtttcagaaatgcgttaacaggtggtgaagtgaacaactca
tttggtattgtagttgatgaagatagactcgacaccgtggtaaacttagctgtcctagat
gaatatgcagcaacgaaatgggagacaattttacattttatggtcggtactccaatggca
aaaatgccatcggaaaatgttcttaatctattaaaacatagcaaattaatggaagaagtt
cccgactcctctgagtttatgattactaatgaaggttttcaattccttctacaggaagtt
aactcacaaatctggtcattacttttacagtatctgaaactagccgaatcattgcatatg
gacccagttcatgtcttgaactttatctttatgctaggtgctttagagactggaaaggca
tatagcacagaaaacctcagcgaaactcaattaaaaatgcttctcgatatgagagattat
ggtctagtgtttcaaaaaacaagtaatcctaatatattctatccgacacggttggcacaa
atgttgacgtcagatactaagagcatgagaacagcatctggtgctatggagagtgttcta
aacaaacctgacgatgcggcaaaatcaacggatgacaaatatgattcattggaaggtaaa
gctgaggatatacaagatggtgctctgattattgaaaccaacttcaaactatactcatac
tgcaactcacccttacagatagctattctaagtttatttgtgcatttgaaatctagattt
gctaatatggtggctggtcaaattacaagagaatctatcagaagagctttaatcaatggt
atcactgctgatcaggtaattgcttatttagaatctcatgcgcatcctcagatgagaaga
ttagctgaggaaaaactgcaaaagaaattagaactagatcccaactgtaaagatcccttg
caagtgctacccccaaccgtcgtcgatcaaattaaattatggcaactagaattagataga
gtgttaacgtatgaaggttctctatacattgactttgatacagcacaagatttcaatatg
ctctgtaaatatgcacaggatattggcgctctactatggaaagatgataggaagagaaaa
ctatttgtttctagagagggtaatgctcaagttctagagtatgcaaaaaggaaaatcaaa
aagaaggaagaataa
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