KEGG   Nakaseomyces glabratus: CAGL0M07029g
Entry
CAGL0M07029g      CDS       T01024                                 
Name
(RefSeq) uncharacterized protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
cgr  Nakaseomyces glabratus
Pathway
cgr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAGL0M07029g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgr03019]
    CAGL0M07029g
Messenger RNA biogenesis [BR:cgr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     CAGL0M07029g
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     CAGL0M07029g
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 2891702
NCBI-ProteinID: XP_449653
UniProt: Q6FJE1
LinkDB
Position
M:complement(713658..716174)
AA seq 838 aa
MSQRRRESALNFEETYNGFGEHELEENDYLNDETFGADIEVGTDFDFGHPGKAATNNNVP
AQASVMPQRSYVTAASSGINKPGQQNVDASMDLKPMESLWGGQTEARPEEPVLSMEEIER
QQRQMQQQQHQGPHGPMPPMPMMPPNMPPPNMAMPPPGYGPMPGYQYPMNVNPSMFQGPP
PPNMAMPPMQPSQGGQPMQPGQGGQPMQPPQRMPMPHQPEPPVQSPMSAVQQSSGVSTPQ
QSVISSSASPANSNQAALHQEQGQQNLAFQQDEQSQQHQQQQQYYQRNRFNNQNNNRGNQ
RREPLSPEEKMRLQIRHAKVEKILKHAGLMTPRDKDFITRYQLSQIVTEDPYNEDFYFQV
YKLIQRGGVAAESNKGLIARAYLEHSGHRLGGRYKRADIALQRMQSQVEKAVTVAKERPQ
KNKDVDSVREGVLGKISTTMNSKAPRRQLAIPSHKSNEDIAFSDDGKLSRDSTPALEEVT
RNLDSVDLNAHSRTRRRSSYAFSSIDHNSVLSRSGGRKFVLSLIETVYEEVLDLEANLRN
DKETDSTALWETLHIDDEVYEVCPFISMLSFDKGVKIIPRIFNFLSKQQKLKLLQKFFSE
LSHLNIIILSSYKTNPDPTESQLKKMDLFQTVFLKIIVSFLSSSSSFIEIMGLLLYLIKN
NNVSFISTSKIGLNLITVLISRAALIRQDSNRSNVLSSPEISTWNEIYDKLFTALESKLS
AVFPPKEYCDKVVKIQTANAGLSLAANPVSNKFYDQAYIWQFLASLALSGKLNHQRIIID
EVRDEIFGTINTAEQLKKLPTEDQNGSLYRREKLYQDLNLFLNVMGLVSRDGEIMELK
NT seq 2517 nt   +upstreamnt  +downstreamnt
atgagtcagagaagaagagagagtgctctaaattttgaagaaacctataatggttttgga
gaacatgagctggaagagaacgattacttgaatgacgagaccttcggtgcagacattgaa
gttggtaccgattttgatttcggccaccctggcaaggctgccactaacaataatgttcct
gcacaagcaagtgtcatgcctcaaagatcctatgttaccgcggcatcatccggtattaat
aagccaggtcaacaaaatgttgatgcctcaatggatttgaagccaatggagtcattgtgg
ggtggacaaactgaagcaagaccggaagagcctgtattgtcaatggaggaaattgagaga
cagcaacgtcagatgcaacaacagcagcatcaaggtccacatggcccaatgcctccaatg
cccatgatgcccccaaacatgcctcctccaaacatggccatgcctcctccaggttatggt
cctatgccaggttatcaatatccaatgaatgtcaatcctagcatgttccaaggcccacca
cctccaaatatggctatgcctcctatgcagcctagtcaaggtggtcagcctatgcagcct
ggtcaaggtggtcagcctatgcaaccacctcagaggatgccaatgcctcaccaacctgag
ccacctgttcagtctcctatgtcagctgttcaacaatcctccggtgtttcaactcctcaa
cagtcagtgatctctagttcggcatcaccagctaatagtaatcaagcagctctgcatcaa
gaacaaggccagcaaaacctagctttccaacaagatgaacaaagccagcaacatcaacaa
caacagcaatactaccaacgtaatagattcaataatcaaaacaacaacagaggaaatcaa
agaagagagccattgtctcctgaagagaaaatgagattgcaaattcgccacgccaaggtt
gaaaagattttgaagcatgctggtttgatgactccaagggacaaggatttcattacacgt
tatcaactatcccaaattgtcactgaggatccgtacaacgaggacttctatttccaggtt
tataagttaattcaaagaggaggtgttgctgctgaaagcaacaaaggtctaattgccaga
gcttacttagagcattccggtcatagattaggtggtagatacaagcgtgctgatattgct
ttgcagagaatgcaaagtcaagttgaaaaggcggttactgttgccaaggaaagacctcaa
aaaaataaggacgttgacagcgtccgtgaaggtgtcttgggtaagatttccacaactatg
aacagtaaagcaccaagaagacaattggccattccatcccataaatcaaacgaagatatt
gcattctctgatgatggtaagctttctcgtgattcaactccagcccttgaagaagttact
aggaacctagacagtgttgatttgaacgcccactcgagaactagaagaagatcatcatat
gccttctcctctatcgaccacaactcagtcctaagccgttcaggtggtagaaagtttgtt
ctttctttaatcgaaactgtttatgaagaggttttggacttggaagctaacttgagaaat
gataaggaaacagatagcactgcattgtgggagactcttcatattgatgatgaagtctat
gaggtttgtccattcatttcaatgctatcctttgacaaaggtgtgaaaattattccacgt
attttcaactttttgagtaagcaacaaaaattgaagctactccaaaagttcttcagtgaa
ttatctcatttaaacatcattatcttgagttcatataagaccaatccagaccctactgag
tctcaactaaagaaaatggatttattccaaactgttttcctaaagattatagtttccttc
ttatcctccagctccagctttattgaaattatgggtttattgttgtatttgattaagaat
aacaacgtctcattcatttctacatcaaagattggtctaaacttaataactgtgttaata
tcaagagcagctttgattagacaagactctaacagaagtaatgttttgtcatctccagaa
atttctacatggaatgaaatttacgacaaactattcacagctttggaaagtaagctatct
gcagttttcccacctaaagaatattgtgataaagtcgttaagattcaaactgcaaatgct
ggtctttcactagcagctaaccctgttagtaacaagttctatgatcaagcatatatatgg
caatttttggcttctctggcattaagtggtaagctaaatcaccagcgtataataatagat
gaggtcagagatgagatatttggcactattaataccgctgagcaattgaagaagctacct
actgaagatcaaaatggctcgttgtacagacgagaaaagctgtaccaggacctaaattta
ttcttgaacgttatgggcttggtatcaagggatggtgagatcatggaattaaaatag

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