Nakaseomyces glabratus: CAGL0M07029g
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Entry
CAGL0M07029g CDS
T01024
Name
(RefSeq) uncharacterized protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cgr
Nakaseomyces glabratus
Pathway
cgr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAGL0M07029g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgr03019
]
CAGL0M07029g
Messenger RNA biogenesis [BR:
cgr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
CAGL0M07029g
mRNA degradation factors
5'-3' decay
Decapping complex
CAGL0M07029g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
2891702
NCBI-ProteinID:
XP_449653
UniProt:
Q6FJE1
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Position
M:complement(713658..716174)
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AA seq
838 aa
AA seq
DB search
MSQRRRESALNFEETYNGFGEHELEENDYLNDETFGADIEVGTDFDFGHPGKAATNNNVP
AQASVMPQRSYVTAASSGINKPGQQNVDASMDLKPMESLWGGQTEARPEEPVLSMEEIER
QQRQMQQQQHQGPHGPMPPMPMMPPNMPPPNMAMPPPGYGPMPGYQYPMNVNPSMFQGPP
PPNMAMPPMQPSQGGQPMQPGQGGQPMQPPQRMPMPHQPEPPVQSPMSAVQQSSGVSTPQ
QSVISSSASPANSNQAALHQEQGQQNLAFQQDEQSQQHQQQQQYYQRNRFNNQNNNRGNQ
RREPLSPEEKMRLQIRHAKVEKILKHAGLMTPRDKDFITRYQLSQIVTEDPYNEDFYFQV
YKLIQRGGVAAESNKGLIARAYLEHSGHRLGGRYKRADIALQRMQSQVEKAVTVAKERPQ
KNKDVDSVREGVLGKISTTMNSKAPRRQLAIPSHKSNEDIAFSDDGKLSRDSTPALEEVT
RNLDSVDLNAHSRTRRRSSYAFSSIDHNSVLSRSGGRKFVLSLIETVYEEVLDLEANLRN
DKETDSTALWETLHIDDEVYEVCPFISMLSFDKGVKIIPRIFNFLSKQQKLKLLQKFFSE
LSHLNIIILSSYKTNPDPTESQLKKMDLFQTVFLKIIVSFLSSSSSFIEIMGLLLYLIKN
NNVSFISTSKIGLNLITVLISRAALIRQDSNRSNVLSSPEISTWNEIYDKLFTALESKLS
AVFPPKEYCDKVVKIQTANAGLSLAANPVSNKFYDQAYIWQFLASLALSGKLNHQRIIID
EVRDEIFGTINTAEQLKKLPTEDQNGSLYRREKLYQDLNLFLNVMGLVSRDGEIMELK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagagaagaagagagagtgctctaaattttgaagaaacctataatggttttgga
gaacatgagctggaagagaacgattacttgaatgacgagaccttcggtgcagacattgaa
gttggtaccgattttgatttcggccaccctggcaaggctgccactaacaataatgttcct
gcacaagcaagtgtcatgcctcaaagatcctatgttaccgcggcatcatccggtattaat
aagccaggtcaacaaaatgttgatgcctcaatggatttgaagccaatggagtcattgtgg
ggtggacaaactgaagcaagaccggaagagcctgtattgtcaatggaggaaattgagaga
cagcaacgtcagatgcaacaacagcagcatcaaggtccacatggcccaatgcctccaatg
cccatgatgcccccaaacatgcctcctccaaacatggccatgcctcctccaggttatggt
cctatgccaggttatcaatatccaatgaatgtcaatcctagcatgttccaaggcccacca
cctccaaatatggctatgcctcctatgcagcctagtcaaggtggtcagcctatgcagcct
ggtcaaggtggtcagcctatgcaaccacctcagaggatgccaatgcctcaccaacctgag
ccacctgttcagtctcctatgtcagctgttcaacaatcctccggtgtttcaactcctcaa
cagtcagtgatctctagttcggcatcaccagctaatagtaatcaagcagctctgcatcaa
gaacaaggccagcaaaacctagctttccaacaagatgaacaaagccagcaacatcaacaa
caacagcaatactaccaacgtaatagattcaataatcaaaacaacaacagaggaaatcaa
agaagagagccattgtctcctgaagagaaaatgagattgcaaattcgccacgccaaggtt
gaaaagattttgaagcatgctggtttgatgactccaagggacaaggatttcattacacgt
tatcaactatcccaaattgtcactgaggatccgtacaacgaggacttctatttccaggtt
tataagttaattcaaagaggaggtgttgctgctgaaagcaacaaaggtctaattgccaga
gcttacttagagcattccggtcatagattaggtggtagatacaagcgtgctgatattgct
ttgcagagaatgcaaagtcaagttgaaaaggcggttactgttgccaaggaaagacctcaa
aaaaataaggacgttgacagcgtccgtgaaggtgtcttgggtaagatttccacaactatg
aacagtaaagcaccaagaagacaattggccattccatcccataaatcaaacgaagatatt
gcattctctgatgatggtaagctttctcgtgattcaactccagcccttgaagaagttact
aggaacctagacagtgttgatttgaacgcccactcgagaactagaagaagatcatcatat
gccttctcctctatcgaccacaactcagtcctaagccgttcaggtggtagaaagtttgtt
ctttctttaatcgaaactgtttatgaagaggttttggacttggaagctaacttgagaaat
gataaggaaacagatagcactgcattgtgggagactcttcatattgatgatgaagtctat
gaggtttgtccattcatttcaatgctatcctttgacaaaggtgtgaaaattattccacgt
attttcaactttttgagtaagcaacaaaaattgaagctactccaaaagttcttcagtgaa
ttatctcatttaaacatcattatcttgagttcatataagaccaatccagaccctactgag
tctcaactaaagaaaatggatttattccaaactgttttcctaaagattatagtttccttc
ttatcctccagctccagctttattgaaattatgggtttattgttgtatttgattaagaat
aacaacgtctcattcatttctacatcaaagattggtctaaacttaataactgtgttaata
tcaagagcagctttgattagacaagactctaacagaagtaatgttttgtcatctccagaa
atttctacatggaatgaaatttacgacaaactattcacagctttggaaagtaagctatct
gcagttttcccacctaaagaatattgtgataaagtcgttaagattcaaactgcaaatgct
ggtctttcactagcagctaaccctgttagtaacaagttctatgatcaagcatatatatgg
caatttttggcttctctggcattaagtggtaagctaaatcaccagcgtataataatagat
gaggtcagagatgagatatttggcactattaataccgctgagcaattgaagaagctacct
actgaagatcaaaatggctcgttgtacagacgagaaaagctgtaccaggacctaaattta
ttcttgaacgttatgggcttggtatcaagggatggtgagatcatggaattaaaatag
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