Cutibacterium granulosum: 4412665_01409
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Entry
4412665_01409 CDS
T05425
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cgrn
Cutibacterium granulosum
Pathway
cgrn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgrn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4412665_01409 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgrn03021
]
4412665_01409 (rho)
03019 Messenger RNA biogenesis [BR:
cgrn03019
]
4412665_01409 (rho)
Transcription machinery [BR:
cgrn03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
4412665_01409 (rho)
Messenger RNA biogenesis [BR:
cgrn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
4412665_01409 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
Spore_III_AA
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
SNV36791
UniProt:
A0A239WQM3
LinkDB
All DBs
Position
1:complement(1639880..1641973)
Genome browser
AA seq
697 aa
AA seq
DB search
MNRRPPSGSLAPLTDPGSSRPSLTFEGTSVTQTPNSGKPTGTLSAMLLPELRSIANQLGI
KGARQMRKADLITAIREAGWPEDGGAPGDGAGRSARTARKSENRLPAGDDSTANSAEPEP
SASRRSTSERAGENHVDGQDATEHRGTRRRAARSPRRESPSDNQRHSDEQQRAQTSESVG
ALLDAQSGDHDQERSGDRQSGNTRSSGRGSRGSQDSRGRSSHDPGDHHGSRQADGANADV
TEEVGARLDALAGRNHDDEASENSAKRGGNRHDGNRRDDDNSRNDSEYGGRRNRRRRQRD
RQGRRPRRNGYNDSEPNLREDDVLVPCNGILDIRDQYAFVRTSGYLPSSEDAYVSMSMVR
RNGLRKGDVISGQMRAKRENDRREKFAPLARIESVNGLDPEKVRQRPEFSKLTPLYPQER
LRLEDSPKNMTGRIIDLVSPIGKGQRGLIVSPPKAGKTMIMQSVANSITTNNPEAHLMIV
LVDERPEEVTDFQRTVSGEVIASTFDRPADDHTQVAELAIERAKRLVEMGQDVVILLDGI
TRLGRAYNLAAPASGRILSGGVDSAALYPPKKFFGAARNIENGGSLTILATALVETGSKM
DEVIFEEFKGTGNMELRLRREFANKRLFPAIDVDASSTRREELLLSREETAIMWKLRRVL
SGLEDSQALEMLLSKLRRTQTNAEFLYTISKTTPSVE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacgaccgccgtctggatccctcgcacccctcactgatccgggatccagcagg
ccctcactcacattcgaagggacatccgtgacacaaacccccaattccggaaagcccacc
ggaacgctgtcggccatgctcctgccagagcttcgttcgattgccaaccagctgggcatc
aaaggggccagacagatgcgcaaggcagacctcatcacggcaattcgtgaagcaggttgg
ccggaggacggcggcgcaccgggcgatggagccggcaggtctgcccgcactgcgaggaaa
tccgagaacaggctgcccgctggtgacgactcgactgcgaactctgctgagcctgagccc
tcagcgagccgacgctccacctccgagcgtgccggtgagaaccatgtcgatggccaggat
gccaccgagcatcgcggtactcgacgccgtgccgctcgtagcccacgtcgggagtccccc
tcggacaatcagcgtcactccgacgagcagcagcgcgcccagaccagcgaatccgtcgga
gccctgctcgacgcgcagagtggcgatcatgaccaggaacgcagcggggaccggcagagc
ggcaacacacgaagctccggacggggttcgcgcggatcgcaggactcccgcggtcggtcc
agccacgatccgggcgatcatcacggttcccggcaagccgatggtgcgaatgccgatgtg
accgaggaggtgggtgcccgtctggacgccctggctggccgcaaccacgatgacgaggca
tccgagaactctgccaagcgcggtggcaaccgtcatgacggcaaccggcgtgacgacgac
aactcacgcaatgactcagagtatggcggcaggcggaaccgccggcgtcgccaacgagat
cgccagggccgtcgcccccgccgcaatgggtacaacgactccgagcccaacctgcgcgag
gatgacgtcctcgtgccgtgcaacggaatcctcgacattcgcgaccagtacgccttcgtc
cgtacctccggctacctgcccagctccgaggacgcctacgtctcgatgtccatggtgcga
cgcaacggtctgcgcaagggagacgtcatctcgggtcagatgcgtgccaagcgcgagaat
gaccgtcgtgagaagttcgcgcccctggcgcgcatcgagtcggtcaacggcctggaccca
gagaaggttcgtcagcgtccggagttctccaagctcactccgctgtatccccaggagagg
ctgcggctggaggacagtccgaagaacatgactgggcgcatcatcgatctggtgagcccg
atcggcaagggccagcgtggcctcatcgtctcgccccccaaggccggcaagacgatgatc
atgcagtccgtcgccaactccatcacgacgaacaatcccgaggcgcacctcatgatcgtc
ctggtggatgaacgccccgaggaagtcaccgacttccagcgcaccgtgtcaggggaggtc
atcgcctccaccttcgatcgacccgccgacgaccacacccaggtggccgaactcgccatc
gagcgtgccaagcgtctggtcgagatgggccaggacgtcgtcatcctgttggacggcatc
acccgtctgggacgtgcctacaacctggcggctccggcctccggacgcatcctctccggc
ggtgtcgactccgctgcgctctacccgcccaagaagttcttcggtgccgcccgcaacatc
gagaacggtggatccctgaccatcctggccacggcgctggtggagaccggctccaagatg
gacgaggtcatcttcgaggagttcaagggaaccggcaacatggagctgcggctgcgtcgg
gaattcgccaacaagcggctcttcccggccatcgatgtggatgcctcgagcacccgacgt
gaggagctgctgctctctcgcgaggagacggcgatcatgtggaagctgcgtcgcgtcctg
tcgggtctggaggattcccaggccctcgagatgttgttgtccaagctgcgcagaacgcag
acgaatgcggaattcctctacaccatctcgaagaccaccccgtcggtggaatga
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