Candidatus Campbellbacteria bacterium GW2011_OD1_34_28: UR58_C0001G0178
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Entry
UR58_C0001G0178 CDS
T04488
Name
(GenBank) transcriptional regulator TrmB
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
cgw
Candidatus Campbellbacteria bacterium GW2011_OD1_34_28
Brite
KEGG Orthology (KO) [BR:
cgw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgw03000
]
UR58_C0001G0178
Transcription factors [BR:
cgw03000
]
Prokaryotic type
Helix-turn-helix
Other families
UR58_C0001G0178
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
HTH_9
HTH_24
HTH_28
HTH_36
HTH_45
DUF2482
YnfE
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
AKM83895
LinkDB
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Position
186404..187189
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AA seq
261 aa
AA seq
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MSEWQTPPLKQAVYNEIFEQLGLSKNEAKIYETLLREGVSPVSHISLKANIHRRNVYDSI
NRLIEKGFVFEIVQKNENNYKAVNPDKLMELIKEKEEMLSKIMPDIKKLYKNKPHHEDVC
IYKGIEGWKNYMKDVLTTGEDLYTLGGKGAWSDKRLDKFSEHIISEFKKKGIKTMALFDY
EVKEKNSEITKKMKGNYKILPKQYSTSSAIDIFGDHIVIVSDISLEKIDENSSFTVIINK
DIADALRIWFKLIWNSIPEQK
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagtggcaaacaccaccactgaaacaagctgtgtataacgaaatatttgaacaa
ttaggcctatcaaagaatgaggcaaaaatatatgaaacccttttaagagagggtgtttct
cctgttagtcatatatctttaaaagcgaatattcacagaagaaatgtgtatgattcaatc
aacagactgatagaaaaagggtttgtctttgaaattgtccaaaaaaatgagaacaactac
aaagcggtcaatcctgataagttgatggagttgatcaaagaaaaagaagagatgctctca
aaaataatgcccgatataaaaaaattatataagaacaaaccacaccacgaagatgtctgt
atttataaaggaattgagggttggaaaaactacatgaaagatgttttgacaacaggagaa
gatttgtacactttgggaggaaaaggagcatggtcagacaaaagattggataaattttcc
gaacatatcatttcagaatttaagaaaaaaggtataaagacgatggctttgtttgattat
gaagtgaaagagaaaaattcagaaataacaaaaaaaatgaaaggtaattataaaatatta
ccaaaacaatactcaacatcatcagcaatagatattttcggagatcatattgtaattgta
tccgacattagcttggaaaaaattgatgaaaattcttcttttactgtaataataaataaa
gatattgcagatgctctcaggatctggtttaaattgatctggaattctataccagaacaa
aaataa
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