Clupea harengus (Atlantic herring): 105889246
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Entry
105889246 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105889246
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105889246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
MIC19_MIC25
Motif
Other DBs
NCBI-GeneID:
105889246
NCBI-ProteinID:
XP_031440290
UniProt:
A0A6P8GZQ8
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Position
17:complement(12323207..12327741)
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AA seq
556 aa
AA seq
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MAEANVFVSQDQFSCPICLDLLKDPVAIPCGHSFCMDCIKGCWDQEDLKGVHSCPQCRQT
FSPRPVLGKNTILADMVEMLKKTGLNSVSQSPLYAGPGDVECDVCIGRKQKAVKSCLVCL
ASYCETHFRAHNDLNPGKKHKVIDATGKLQDLICSHHDKLLEVFCRTEQTCICLLCVMDE
HSGHKTVSAAAERTEKQKQLEKTHTTSQERISERVKELELLRQAVDTLKSSAQAAVEDSE
MIFTEMIRSIERRRSELTEVIRDQERAEVSRAEDLMEKLEQEIAELKKRDAELEQLSHTD
NHICFLQSFQSLCSSSAPDNSPRHTVHTDLSFDEVKERLSQLREKLEDALQQGLKDISKT
AELVGFLSLPEPTTREDFLAYACQLTLDSNTAHNVLTLSEGNSVGEVCPNVNSSYPDHPD
RFDLWPQVLCREAVSKHCYWEVEWSGSYVHIAVSYKGLSRKGRANDCALGRNNKSWSLHC
SSSSYTFIHDDGQILLPHKPTSTSRIGVYVDHKTGTLSFYSVSDTMTLLHKIHTTFIEPL
YPGFLLNTNCKIRLCQ
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccaatgtttttgtgtctcaggatcagttcagctgtccaatttgtctagat
ctgctgaaggatccagtggcaattccctgtggccacagtttttgtatggattgtatcaag
ggctgctgggatcaggaagatctgaagggagtccacagctgcccacagtgcagacagacc
ttctcaccaaggccagtcctcgggaaaaataccatattggctgacatggtagagatgcta
aaaaagacaggacttaattctgtttcccaatctccactctatgctggacccggagatgtg
gagtgtgacgtctgcattgggagaaaacaaaaagcagtcaagtcctgtctggtgtgtctg
gcctcttactgtgaaactcacttcagagctcacaatgatctcaacccagggaagaaacac
aaagtgattgatgccacgggaaaactacaggatctgatctgctctcatcatgataaacta
ctggaggtcttctgtcgcactgaacaaacctgcatatgtttgctttgtgttatggatgaa
cacagtgggcacaagacagtctctgctgcagcagaaaggactgagaaacagaaacagcta
gagaagactcacacaacatctcaggagagaatcagtgagagggtgaaggaactggagctg
ttgagacaggctgtggacactctgaagagctctgctcaggcagcagtggaggacagtgag
atgatcttcactgaaatgatccgctccattgagagaagacgctctgagttgacagaggtg
atcagagatcaggagagggctgaagtgagtcgagcagaagatctcatggagaaactggag
caggagattgctgagctgaagaaaagagatgctgagctggagcagctttcacacactgac
aaccacatttgtttccttcagagtttccagtctctctgttcctcctctgctcctgacaac
tcacccagacacacggtccacacagatctgtcttttgatgaagtaaaagaaagactttct
cagctcagggagaagctagaggatgcactccagcagggactaaaggacatttctaaaact
gcagagcttgttggctttctatcactgcctgagcccacgaccagagaagatttcctggca
tatgcctgccagctaaccctggattccaacactgctcataatgtcctcacactgtctgag
ggaaacagtgttggagaagtgtgccctaatgtgaatagctcatatcctgaccatccagac
agatttgatttatggcctcaggtgctgtgtagagaagctgtatctaaacactgctactgg
gaggttgagtggtcaggatcatatgttcacattgctgtatcatacaaagggctctcaagg
aaaggaagggctaatgattgtgcactaggacgcaataacaagtcttggagtttgcactgc
tcttcatctagttacacattcatacatgatgatggacaaatactactccctcataagccc
acctccacctctagaataggagtgtatgttgatcacaagacaggaactctgtctttctac
agtgtctctgatacaatgactcttctgcacaaaatacacaccacattcattgagccactg
tatcctggatttttgctcaataccaactgcaaaattagattgtgtcagtga
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