Clupea harengus (Atlantic herring): 105889247
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Entry
105889247 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105889247
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105889247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
zf-RING_5
zf-RING_6
TM_PBP2_N
ApoLp-III
Motif
Other DBs
NCBI-GeneID:
105889247
NCBI-ProteinID:
XP_031440124
Ensembl:
ENSCHAG00000027493
UniProt:
A0A6P8GLU0
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Position
17:complement(11786130..11790003)
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AA seq
554 aa
AA seq
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MAEASVVWSQDQFSCPICLDLLKDPVTIPCGHSFCMDCITSCWDQEDLKGVHSCPQCRQT
FTPRPVLGRNTMLAEVVEKLKIMGLQAAPPAHCYAGPGDVECDVCIGRKRKAVKSCLVCL
SSYCETHFRVHNDLNPGKKHKVIEAADKLKDLICSHHDKLLEVFCRTDQRCICMLCVMDE
HNGHKTVSVAAERTEKQKLLGDTQRKSQRIIQEKENELQDLRQAVKTLQSSSQATVEDSE
RIFTEIIRSIERKRSELTELIRDQERAEVSRAEELMEKLEQEIAELKKREAELEQFSHTD
NHICFLQSFQSLCSSSAPDNSSRHTIHTDLSFDQVKERLSQLREKLEDALQQGLKDISKT
AELVSFLSLPEPTTREDFLEYACQLTLDPNTAHNYLTLSEGNRVVEYCPNVNHSYPDHPD
RFDSWCQVLCREAVSKHCYWEVEWSGGVLIAVSYKGLSRRGGGIDCLLGYNNKSWSLDCS
SSNYTFIHDGKRISLRHKHTTSKIGVYVDHKTGTLSFYSVSDTMTLLHKIHTTFTEPLYP
GFYLNNNRKIRLCQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggccagtgttgtatggagtcaggaccagtttagctgtccaatctgtcttgat
ctactgaaggaccctgtgactattccttgtggacacagtttctgtatggattgtatcaca
agctgctgggatcaggaagatctgaagggagtccacagctgcccacagtgcagacagacc
ttcacaccaaggccagttctgggcagaaacaccatgctggctgaagtggtggagaagctg
aagattatgggactccaagctgctccacctgctcactgttatgctggacccggagatgtg
gagtgtgacgtctgcattgggagaaaacgaaaggcagtcaagtcctgtctggtgtgtttg
tcctcttactgtgaaactcacttcagagttcataacgatctcaacccagggaagaaacac
aaagtgattgaagctgctgataaactaaaagatctgatctgctctcatcatgataaacta
ctagaggtcttctgtcgcactgatcagaggtgcatatgtatgctgtgtgtcatggatgaa
cataatggacataaaacagtttcagtcgcagcagagagaactgagaaacagaaactgttg
ggtgatactcagagaaaatcccaacggataatccaggaaaaagagaatgaactgcaggac
ctgagacaggctgtgaaaactcttcagagttcttcacaggcaacagtggaggacagtgag
aggatctttactgaaataatccgctccattgagagaaaacgcagtgagttgacagaactg
atcagagatcaggaaagggctgaggtgagtcgagcagaagaactcatggagaaactggag
caggagattgctgagctgaagaagagagaagctgagctggagcagttttcacacactgac
aaccacatttgtttccttcagagttttcagtctctctgttcctcctctgctcctgacaac
tcatccagacacacgatccacacagatctgtcttttgatcaagtaaaagaaagactttct
cagctcagggagaaactagaggatgcactccagcagggactaaaggacatttctaaaact
gcagagcttgttagctttctatcactgcctgagcccacgacaagagaggatttcctggag
tatgcctgccagctaaccctggatcccaacactgctcataattacctcacactgtctgag
ggaaacagagttgtagaatattgccctaatgtgaatcattcatatcctgaccatccagac
agatttgattcatggtgtcaggtgctgtgtagagaagctgtatctaaacactgctactgg
gaggttgagtggtcaggaggtgttttaattgctgtatcatacaaagggctctcaaggaga
ggagggggtattgattgtttactaggatacaataacaagtcttggagtttggactgctct
tcatccaactacacattcatacatgatggtaaacgaatctcactccgtcataagcacacc
acctctaaaataggagtgtatgttgatcacaagacaggaactctgtctttctacagtgtc
tctgatacaatgactcttctgcacaaaattcacaccacattcactgagccactgtatcct
ggcttttacctcaataataacaggaaaatcagattgtgtcagtga
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