Clupea harengus (Atlantic herring): 105889664
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Entry
105889664 CDS
T09045
Symbol
pmpca
Name
(RefSeq) mitochondrial-processing peptidase subunit alpha
KO
K01412
mitochondrial-processing peptidase subunit alpha [EC:
3.4.24.64
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
105889664 (pmpca)
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
char03029
]
105889664 (pmpca)
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.64 mitochondrial processing peptidase
105889664 (pmpca)
Peptidases and inhibitors [BR:
char01002
]
Metallo peptidases
Family M16: pitrilysin family
105889664 (pmpca)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105889664 (pmpca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M16
Peptidase_M16_C
DUF2695
Motif
Other DBs
NCBI-GeneID:
105889664
NCBI-ProteinID:
XP_031440942
Ensembl:
ENSCHAG00000025927
UniProt:
A0A6P8GZP2
LinkDB
All DBs
Position
18:670030..682714
Genome browser
AA seq
519 aa
AA seq
DB search
MATHMSRFKAWGRVQRFGIAACRQYSSGSSNGYPNVSLSAPLPGIPKPVFASVDGQEQYE
TKITTLENGLKVASQNKFGEFCTVGILVNSGSRHEVRYPSGISHFVEKLAFSSTAQFGSK
DEILMTLEKHGGICDCQTSRDTTMYAVSAEVKGLDTVVSLLSDAVLQPRLLDEEIEMARM
AVRFELEDLNMRPDPEPLLTEMIHAAAYRGNTVGLARFCPVENVEKIDRALLHSYLRSYY
CPERMVLAGVGIEHEQLVACARKYMLDLKPVWGASTAGNVDLSVAQYTGGIIKMDKDMSD
VSLGPTPIPELTHIMIGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKGMFTRLYLN
VLNRHHWMYNATAYHHSYEDSGLLCIHASADPRQVREMVEIITREFIQMAGTAGEMELER
AKTQLKSMLMMNLESRPVIFEDVGRQVLATGKRKLPHELCQLISNVTANDIKRVTAKMLR
AKPAVAALGDLTEMPSYEHIQAALSSKDGRLPRTYRLFR
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccacatgtcaagatttaaggcttggggacgagtacagaggtttggcatcgcc
gcatgtaggcagtacagcagtggcagcagcaatggttatccaaatgtgtctctttccgcc
cccttacctggaatcccaaagccagtgttcgcttctgtggacggacaggaacagtacgaa
acaaagatcacaactcttgaaaacggccttaaagttgcctcacagaataaatttggcgaa
ttttgcacagttggaattttagtaaactccggatcaagacatgaagttagatacccaagt
gggatctcacattttgtggagaagcttgccttttcttccacagcacagtttggaagtaag
gacgaaattctcatgactctggagaaacatggtggcatctgtgactgtcaaacatccaga
gacactactatgtatgctgtgtctgcggaggtgaagggcctggatactgtggtcagcctt
ctgtcagatgctgttctgcagccacgcttgctagatgaggaaattgagatggcaaggatg
gcagtccgttttgagctggaggatctgaacatgaggccggaccctgagcctctgctcaca
gaaatgatccacgcagctgcatatcgtgggaacacagtcgggctggctcgcttctgccct
gtggagaacgtggagaagatagaccgggctctgctccactcctatctcaggagttattac
tgccccgagcgcatggtcctggccggcgtggggatcgagcatgaacagctggtggcctgt
gccaggaagtacatgctcgacctgaagcccgtgtggggagccagcacagcaggcaatgtg
gacctgtcagtagcccagtatactgggggcatcatcaagatggataaagacatgtcagat
gtgagtcttggtcccactcctatccctgagctaacacacatcatgattgggctggagagt
tgctcgttcctggaggatgacttcattccttttgccgtcctcaacatgatgatgggaggc
ggaggctccttctctgcaggtggcccgggaaaaggcatgtttacacgtctctacctgaat
gtgctcaacagacatcactggatgtacaatgctactgcttaccaccacagctacgaggac
agtggtctcttgtgcatccatgccagtgccgaccccagacaggtgcgggagatggttgag
attataactagagagttcattcagatggccggaacagcaggagagatggagctggagaga
gcaaagacgcagcttaagtcgatgctcatgatgaatctggagtcacgtccggttatcttt
gaagatgttggacggcaagttctagccacaggcaagaggaagctgccccatgagctgtgt
cagttaatcagtaatgttacagcgaatgacattaagagggtgacggcgaagatgctgcgt
gctaaaccagcggtggcggcactgggcgacctcacagagatgccctcgtatgagcacatc
caagcagcactctccagcaaagatggacgcctgccccggacgtatcgtctcttccgatag
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