Clupea harengus (Atlantic herring): 105891643
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Entry
105891643 CDS
T09045
Symbol
syt5a
Name
(RefSeq) synaptotagmin Va isoform X1
KO
K19905
synaptotagmin-5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105891643 (syt5a)
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
105891643 (syt5a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
DOCK-C2
PTEN_C2
TMEMspv1-c74-12
SARAF
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
105891643
NCBI-ProteinID:
XP_031425608
Ensembl:
ENSCHAG00000018641
UniProt:
A0A6P8FAQ8
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Position
1:18584502..18595175
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AA seq
409 aa
AA seq
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MRLVSLQQRLRRAAEPEEKAPPPPPPPPAVHNHNFMNMKNKFFNELDHLPNHKLNMPMWA
IGAIVVVVLALVGCFAFCIYKKCLGGKKKGKKVRERKGGGGRRRRKKDGEGEGGEEEKKE
GEDKEQEFYGKLEYTLDYNFNDNELVVGILQAQDLPAMDMGGTSDPYIKVYMLPDKKKKF
ETKVQRKNLSPVFNETFKFKILFNDLAGQSLVLQAFDFDRFGKHDVIGQITIAMNSIDLA
QPIHEWKDLVGGEKEEEEKLGDICISLRYVPTSGKLTICVMEAKNLKKMDVGGLSDPFVK
LVLQHNGKRVKKKKTTVKQNTLNPYFNESFSFEIPFAQIQKLQVLITVYDYDKLGSNDAI
GKAWIGFGATGVGLRHWSDMLANPRRPVAQWHTLQQEEEVDAALKLPIR
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgattggtcagcctgcagcagcggctgcggcgtgcggcggagccagaggagaaggct
ccgccccctccgcccccaccgccggccgtccacaaccacaacttcatgaacatgaagaac
aagttcttcaatgaactggaccacctccccaaccataagctcaacatgcctatgtgggcc
atcggggcaatagtggtggtggttctggccctggtgggctgctttgccttctgcatctat
aagaagtgcttgggagggaagaagaaagggaagaaagtccgcgagagaaagggtggcggt
ggtcgcagaaggagaaagaaggatggtgaaggcgaggggggtgaggaggagaagaaggag
ggagaggataaggaacaggagttctatggcaagcttgagtacacacttgactacaacttc
aatgacaatgagctcgttgtggggatcctgcaagctcaggacctgcctgccatggacatg
ggcggtacctcagacccttacatcaaagtgtacatgctccctgacaagaagaagaagttt
gagaccaaagtccagcgcaagaacctgtcccccgtcttcaacgagaccttcaaattcaag
atcctctttaatgacctggctggccagtccctggtgctgcaggcctttgactttgaccgc
tttggcaaacatgatgtgattggacagatcaccatcgccatgaacagcattgacctggct
cagcccattcacgagtggaaggatttggttggaggagagaaagaggaggaagagaagctg
ggtgacatctgtatctcactgcgttatgtgcctacatctggtaaactgactatctgtgtg
atggaagccaagaacctgaagaagatggacgtcggtggcttgtcagatccatttgtcaaa
ctggtgctgcaacacaatggcaagcgtgtgaagaagaagaagacgaccgtgaaacagaac
accttaaacccgtacttcaatgagagtttcagctttgagatcccttttgctcagatccag
aaacttcaggtgctcatcactgtgtacgactacgacaagctgggcagcaacgatgccatc
gggaaggcctggatcggcttcggcgccaccggtgtgggcctccgccattggtcagacatg
ctggccaatcccagacgcccggtggctcagtggcacactctgcagcaggaggaggaagtg
gacgccgccctcaagcttcccatccgctaa
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