Clupea harengus (Atlantic herring): 105892045
Help
Entry
105892045 CDS
T09045
Symbol
cthrc1a
Name
(RefSeq) collagen triple helix repeat-containing protein 1a
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105892045 (cthrc1a)
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105892045 (cthrc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Colipase
Motif
Other DBs
NCBI-GeneID:
105892045
NCBI-ProteinID:
XP_012673717
Ensembl:
ENSCHAG00000018745
UniProt:
A0A6P3VJT9
LinkDB
All DBs
Position
19:complement(14088165..14095042)
Genome browser
AA seq
225 aa
AA seq
DB search
MGSVQVVFWVLFIIYHCRAQKVKRQKETEFVDKYGTCLQGPPGTLGRDGNPGVNGIPGTP
GIPGRDGLKGEKGECVSERYEEPWKPNYKQCAWNSLNYGIDLGKIADCTFTKLRSDSALR
VLFSGSLRLKCKSACCQRWYFTFNGAECAGPLPIESIIYLDQGSPELNSTINIHRTSAVE
GLCEGVPAGLVDVGIWVGTCADYPKGDASTGWNSVSRVIIEELPK
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgttcaagtggtgttctgggttttgttcattatttatcactgccgagcacag
aaagttaagcgacaaaaggagacagagttcgtggataagtatggtacgtgtctccaaggc
cctcctggtaccctgggcagggatggtaatccgggggtgaatggcatccctggcacccca
ggtatccctggacgagacggcttgaaaggagagaagggcgagtgtgtgagcgagaggtac
gaggagccctggaagcccaactacaagcagtgtgcctggaactcgctcaactacggcatt
gacctggggaagattgctgactgcaccttcacaaagctgcgctcggacagcgccctgcga
gtgctattcagcggctcgctgcggctcaagtgcaagtcggcctgctgccagcgctggtac
ttcaccttcaacggggccgaatgcgccgggccgctgcccatagagtccatcatctacctg
gaccaaggaagccctgagctcaactctaccatcaacatacaccggacatcagcagtggaa
gggctttgtgagggggtccctgccggcttggtggacgtgggaatctgggtgggcacctgc
gcagactatccgaagggagacgcgtcgactgggtggaactcggtctccagggtgatcatc
gaggagcttcccaaatga
DBGET
integrated database retrieval system
