Clupea harengus (Atlantic herring): 105895841
Help
Entry
105895841 CDS
T09045
Symbol
cacna2d2a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-2a isoform X1
KO
K04859
voltage-dependent calcium channel alpha-2/delta-2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105895841 (cacna2d2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
105895841 (cacna2d2a)
04261 Adrenergic signaling in cardiomyocytes
105895841 (cacna2d2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105895841 (cacna2d2a)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
105895841 (cacna2d2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
105895841
NCBI-ProteinID:
XP_031424149
Ensembl:
ENSCHAG00000021511
UniProt:
A0A6P8FEV3
LinkDB
All DBs
Position
5:complement(25775140..25970224)
Genome browser
AA seq
1111 aa
AA seq
DB search
MALCPQSSGMFCLFSIQTILIICVTSPGTETLKFPQHFTMVHWARRIEKELERVLPLVTG
VQQMKGIYSEKRSQYDTKSNQPKELVERVARNIARLLNSKRKALERLAQEAERLQRETPW
QDGLKESDISYYDSKAEADYSDDDEENLLENPNSLKLDFTDDPNFKNKVNYSYTAVQIPT
DIYKGSPTILNELNWTQALEPVFISNSQEDPSLRWQVFGSATGVTRYYPATPWRAPNKID
LYDVRRRPWYIQGASSPKDMVIIVDVSGSVSGLTLKLIKMSVLEMLDTLSDDDYVTVARF
NEKAEAVVPCFRSLVQANMRNKKIFKQAINLMQAKGTTVYKSGFQFAFELLLNDTGSPRA
NCNKMIMMFTDGGEDRAQEVFEKYNWPNKTVRVFTFSVGQHNYDVTPLQWIACANKGYYF
EIPSIGAIRINTQEYLDVLSRPMVLAGTPAKQVQWTNVYQDALGLGLVITGTMPVFNLTA
DGDTRNQLILGVMGVDITLNEIQALTPRYKLGANGYTFAIDPNGYILLHPNLQPKTINFR
EPVTLDFLDAELQDSNKEEIRRLMIDGRPGKKKIKTLIKSIDERYIDEAMRTYIWTPVDG
TDYSLGLVLPTYSESHIRANLSDQILQVQLPVSDSKDFESLLPNSFESEGHVFIAPREYC
KDLELSSNNTEFLLNFIALMEKVTPDSKQCDNFLLHNLILDTGIIRQLVEKVWKNKDLKT
YGFLAVFAATDGGVTRVFPNKAAETWEEDPEPFNASYYRRSLDNKGYIFRAPYRTVNSEL
LDPENDTIGILVSTALELSVDSRTIKPAVLGVKLDLEAWTEKFKMLATNYTGTRQSSPSC
GSNGCEMDCEANSEDLLCFLIDDGGFLIMSNQRDHWSKIGMFFSEVDPYLMHALYNNSFY
NRKRSHDYQSVCALVPNSNTGAAPRGVFVPTIADFLNMAWWTSAAAWSLLQQMLYGMAYR
SWFVTDTVDADGMESRETSCVKIQTQFYFTNVTSSYNTLQDCGNCSRLFHAKRIENTNLL
FVVAEILPCGSCEIEKLSQVEVDFKEEDPCDVLATARYRKGPSTCFDYNTAENSSDCGRG
HSFSPSIGTLLSLQFLLLSIWVTPQALPLSL
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctgccctcagtcatccggaatgttttgcctgttctcaatccaaactatcctg
atcatctgcgtgacctcgccaggaacagagactctcaaattcccgcagcatttcacgatg
gtccactgggctcgacgcatagagaaggagctggagagggtcctgccgctggtcacggga
gtgcagcagatgaaagggatttacagtgagaagaggagccagtatgacacgaagagcaac
caacccaaggagctggtggagcgggtggcacggaacatcgcccggctgctcaacagcaag
cgcaaggccctggagagactggctcaagaagcggagcgactgcagagggagactccttgg
caagacggcctcaaagagtctgacatctcctattatgactccaaagcagaggctgattac
tcggatgatgatgaggagaacctgctggaaaaccccaactctctgaagttagacttcacg
gatgatcccaacttcaaaaataaggtcaactactcctacacggctgtccagatccccact
gacatctacaagggctcccccaccatcctgaatgagctgaactggacccaggcactggag
cccgtcttcatcagtaacagccaggaggatccctcgctgcgctggcaggtgtttggcagt
gccaccggtgtcaccagatactacccagccaccccatggagagcaccaaataagattgat
ctgtatgatgtgcgccgaagaccatggtacatccaaggagcctcgtctcccaaggacatg
gtcatcattgtggatgtgagtggcagtgtgagtggcctgacgctgaagctgataaagatg
tctgtgctggagatgctggacaccctgtctgatgacgactatgtcactgtagcacggttc
aatgagaaggccgaggcagtggtgccctgcttcaggtccctggtgcaggccaacatgcgc
aacaagaagatcttcaagcaggccattaacctcatgcaggccaaaggcaccacggtctac
aagtctggcttccagttcgccttcgagctgctcctcaatgacaccggttcccccagagcc
aactgtaataagatgatcatgatgttcacagacggaggggaggaccgggcccaggaggtc
tttgagaagtacaactggcccaacaaaacagtcagagtgttcaccttctctgtggggcag
cacaactatgatgtcaccccactgcagtggattgcttgtgccaacaaaggttactacttt
gaaattccatccattggggctatccggatcaacacacaggagtacctggatgttttaagt
cggcccatggtcctggctggaaccccagccaaacaggtccagtggaccaacgtctaccag
gacgctctgggcctgggactggtgatcactggaaccatgcccgtcttcaacctcactgct
gacggggacacacggaatcagctgatcctcggagtaatgggagtggacattacactgaat
gaaattcaagcactcacgcctagatacaagcttggggcaaatggatacacatttgccata
gaccctaatggctacatcctcttgcatcctaacctacagcctaagaccattaacttcaga
gagcccgtcactctagacttcctggatgctgagctgcaggacagcaacaaagaagagatc
cgtcgcctgatgattgatggccggccagggaagaagaagataaagaccctgattaagtcg
atagatgagcgctacattgacgaagccatgagaacttacatctggacccctgtggatgga
acagattacagtttggggctggttctgcccacctacagcgagagccacatccgagccaat
ctgagcgaccagatccttcaggttcagttgccagtgtcagacagcaaggattttgagtca
ctgctgcccaacagctttgagtccgagggccatgtgttcattgctcccagggaatactgc
aaagacctggagctttctagcaacaacactgagtttcttctcaacttcatcgccctgatg
gagaaagtcacgccggactccaagcaatgtgataacttccttctacacaacctaattctg
gacacgggaatcattcgccagcttgtggagaaagtgtggaaaaataaggatctaaagaca
tatggcttcctagcagtctttgcagccacagatggaggggtcacgcgagtgtttcccaat
aaggctgctgaaacttgggaggaggaccctgagcctttcaatgccagctactaccgccgc
agcctggacaacaagggctacatcttcagagctccttaccgcacagtgaacagcgagctc
ctggatccagagaatgacaccatcggcatcctggtcagcacggcgctggagctgtccgtg
gactccaggaccatcaagcctgcagtgttgggtgttaagctggacctcgaggcctggact
gagaagtttaagatgctcgctaccaactacacaggaacccgccagagctccccatcgtgt
ggatcaaatggttgtgagatggactgtgaggccaatagtgaggacctcctgtgcttcctg
atcgacgacggtggattcctgatcatgtccaatcagagagaccactggagtaagattggt
atgtttttcagtgaggttgacccctacctgatgcacgccttgtacaataactccttctac
aaccgcaagcgctcccatgactaccagtccgtgtgtgcgctggtgccaaacagcaacaca
ggagccgcacctcgaggggtgtttgtgccaaccatcgctgatttcctgaacatggcctgg
tggacatcagcagcagcatggtctctgctgcagcagatgctgtatggcatggcctaccgc
agctggtttgtgacagatacggtggatgcggacgggatggagtctagagaaaccagctgt
gtcaagatccagactcagttctacttcaccaacgtcaccagctcctacaacaccctacag
gactgcggcaactgctcccggttgttccatgctaaacggatagagaacaccaacctgctg
tttgtggtggctgagattctaccctgcggctcctgtgagattgagaagctctctcaagtg
gaggtcgacttcaaagaggaggacccgtgtgatgtccttgctacagcacggtatcgaaaa
ggcccttccacctgcttcgactacaacacggcggagaactcgtcagactgtggccggggt
cactccttcagcccctccataggcactcttctctccctccagtttctcctcctttctata
tgggtcactcctcaggccctgcctctctctctttaa
DBGET
integrated database retrieval system
