Clupea harengus (Atlantic herring): 105897541
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Entry
105897541 CDS
T09045
Symbol
atp2b1a
Name
(RefSeq) plasma membrane calcium-transporting ATPase 1a isoform X2
KO
K05850
P-type Ca2+ transporter type 2B [EC:
7.2.2.10
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
105897541 (atp2b1a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
105897541 (atp2b1a)
Enzymes [BR:
char01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
105897541 (atp2b1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cation_ATPase_C
E1-E2_ATPase
ATP_Ca_trans_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
Motif
Other DBs
NCBI-GeneID:
105897541
NCBI-ProteinID:
XP_012679928
Ensembl:
ENSCHAG00000022900
UniProt:
A0A6P3VS68
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Position
16:complement(13365122..13400315)
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AA seq
1245 aa
AA seq
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MANNSYSGVKNPGAQANHDAADFGVTLKELRSLMELRGAEGLTKIQESYGGVHELCSRLK
SAPIEGLSGQPSDIEKRQEVFGKNNIPPKKPKTFLQLVWEALQDVTLIILEVAAIVSLGL
SFYKPPEAEDVDCGKAAGGAEDEGEAEAGWIEGAAILLSVVCVVLVTAFNDWSKEKQFRG
LQSRIEQEQKFTVVRGGQVIQIPVADIVVGDIAQIKYGDLLPADGVLIQGNDLKIDESSL
TGESDHVKKTLQKDPLLLSGTHVMEGSGKMLVTAVGVNSQTGIIFTLLGASEDDEDEDNN
KKEDKKNKKQDGSVENRKKAKAQDGAAMEMQPLNSDEGADAEEKKKSSMPKKEKSVLQGK
LTKLAVQIGKAGLFMSAITVLILVALFAVDTFWIQGLSWAKECTPIYIQFFVKFFIIGVT
VLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRM
TVVQAYLAEKHHRKVPEPEAIHAHVMDMLVLGISVNSAYTTKIMSPEKEGGLPRQVGNKT
ECALLGFVMDLKKDYQAIRNEIPEEKLYKVYTFNSVRKSMSTVLKNSDGSYRMFSKGASE
ILLKKCYKIMTATGEERVFRPRDKDDMVNKVIEPMASEGLRTICMAYRDFPAADGEPDWD
NETDILTSLTCICVVGIEDPVRPEVPDAITRCQRAGITVRMVTGDNINTARAIATKCGIL
LPGDDFLCMEGKEFNRRIRNEKGEIEQERIDKIWPKLRVLARSSPTDKHTLVKGIIDSTV
TEQRQVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWG
RNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTLASLALATE
PPTEALLLRRPYGRNKPLISKTMMKNILGHAVYQLTIIFWLLFAGERVFDIDSGRNAPLH
SPPSEHYTIVFNTFVMMQLFNEINARKIHGERNVFDGIFNNLIFCSIVFGTFIIQIVIVQ
FGGKPFSCVSLTLDQWLWCVFLGFGCLLWGQIISSIPMSWLKFLKSAGHGTQKCEIPDEE
LDGMEEMEEIDHAERELRRGQILWFRGLNRIQTQIRVVNAFRSSLCPYDGLEKPESRTSI
HNFMNHPEFHIEDSEPSIPLIDDTDAEDDAPTKRNNNNSGNTASPSPSPTPTPTPLATTP
PPPSPNQNNNAVESSLHFFLDAGSGKPQASPSAPASPLHSLETSL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacaactcgtacagcggggtgaagaaccccggggctcaggccaaccatgatgcc
gcggactttggggtcacgctcaaggagctgcgctcgctcatggaactgcggggggctgag
ggacttaccaaaatccaggaaagctacggtggcgttcacgaactctgctccagattgaaa
tcggcgcccattgagggtttaagtgggcagccttcagacatcgagaagagacaagaagtg
tttgggaagaacaatatacctccaaagaagccaaaaacatttcttcaattagtttgggaa
gcattacaagatgtgacgttgattatcttagaagtggcagccatagtttcattaggcctt
tcattttataaacctcccgaggccgaggatgtagactgcgggaaagcagctggtggtgcg
gaggatgaaggcgaggcggaggctggctggatcgagggcgctgccatcctgctgtcggtc
gtctgtgtggtgcttgtcacagctttcaatgactggagcaaggagaaacagttccgtggc
ctccagagccgcatcgaacaagaacagaagttcaccgtcgtacggggcggacaggtcatc
cagatcccagtggccgatatagtggtcggggatatagcacaaatcaaatatggtgacctt
ctccctgctgacggcgtcctcatccaagggaatgatctgaagatcgacgagagttcgctg
acgggagagtctgaccacgtgaagaagacgctacagaaagaccccttgctgctctcagga
acccatgtcatggagggctctggaaaaatgctggtcactgccgtgggagtcaactcccaa
actggaataatcttcactttactgggggcttctgaagacgacgaggacgaagacaacaat
aagaaagaggacaagaaaaacaaaaagcaggatggctcggtggaaaaccgaaagaaagcc
aaagcccaggatggagcggccatggaaatgcagcccctcaacagcgatgaaggagccgat
gctgaggagaagaagaagtccagtatgccaaagaaggagaaatctgttctccaggggaag
ttgaccaaactagctgtccagatcggcaaagctggcctgtttatgtcagccatcacagtc
ctcatcctggttgctctctttgctgtggacaccttctggatccagggactgtcatgggcc
aaggagtgcactccaatctacattcagttcttcgtcaagttcttcatcattggcgtcaca
gtgctggtggtggccgtgcctgaaggccttcccctggccgtcaccatctcgctggcttac
tccgttaaaaaaatgatgaaggacaacaacctggtccggcaccttgatgcttgcgagacc
atgggcaacgccactgccatctgctccgacaagacgggcacgctgaccatgaacaggatg
actgtggtgcaggcgtacttggctgagaagcaccacaggaaagtgcccgagcctgaggcc
atccacgcccatgtcatggacatgctcgttctaggcatcagtgtcaactccgcctacact
accaagatcatgtctccggaaaaagagggtgggctgcctcgtcaggtgggcaacaaaacg
gaatgtgccttgctaggcttcgtgatggacttgaaaaaggactaccaagcaatacgcaac
gagatcccagaggagaaactctacaaagtctacaccttcaactctgtcagaaaatccatg
agcactgtgctgaaaaactctgacggcagctaccggatgttcagcaaaggcgcctcagag
attctcctcaagaagtgttataagatcatgactgccacgggtgaagagcgggtgttccgg
ccaagggacaaggacgacatggtgaataaggtgatcgagcccatggcctctgagggcctg
aggaccatctgcatggcctaccgtgacttccccgctgccgacggcgagcccgattgggac
aacgaaactgacatcctcaccagcctcacctgcatctgtgtggtgggcatcgaggacccg
gtcaggccagaggtccctgatgccataacgaggtgccagcgtgccggaatcactgtgcgc
atggtcacaggggacaacatcaacacggcccgcgccatagcaaccaagtgtggcatcctg
ctgccaggcgacgacttcctctgcatggagggcaaagagttcaaccgccgcatacgcaac
gagaagggagagattgaacaggagcgcattgataagatctggcccaagctgcgagtactg
gctaggtcctcccccacagacaagcacacgctagtgaaaggcatcatcgacagcactgtc
acggagcaaaggcaagtggtggcggtgacaggagatggcaccaacgacggccccgccttg
aagaaagccgacgttggatttgccatgggcatcgctgggacggacgtggccaaagaggct
tcggacatcatcctgacagatgacaacttcagcagcatcgtgaaggcagtgatgtggggg
cgtaatgtctatgacagcatctccaagttcctgcagttccagctcaccgtcaacgtggtg
gctgtgatcgtggccttcactggagcctgcatcacacaggactctcccctgaaagcggta
caaatgctgtgggtgaatctgatcatggacaccttagcctccctggcgctagccaccgag
ccacccacagaggccctcttgctcaggaggccgtacggacgcaacaagcctcttatctcg
aagaccatgatgaagaatatattgggccatgccgtctaccagctaaccatcatcttctgg
ctactctttgctggtgagagggtctttgacatcgatagcggcaggaacgcccctctccac
tccccgccctctgagcactacaccattgtctttaacacgttcgtcatgatgcagctcttc
aacgagataaacgcccgcaagatccatggcgagaggaacgtctttgacggaatcttcaac
aaccttatcttctgctccatcgtctttgggactttcatcatccaaattgtcattgtgcag
tttggagggaaaccctttagctgtgtgagtctcactcttgaccaatggctctggtgcgtc
ttcctgggctttggctgtctcctctggggtcagatcatctcttcaattcccatgagctgg
ctgaagttccttaagtcggcgggccacggcacgcagaagtgtgagattcccgacgaggag
ctggacggaatggaggaaatggaggagatcgaccacgctgagcgtgagctgcgccgcggc
cagatcctctggttccgcggcctcaaccgcatccagacccagatccgcgtggtgaatgca
ttccgcagttccctgtgtccttatgacgggctagagaagccagagtcgcgcacctccatc
cacaacttcatgaaccacccagagttccacattgaggactccgagccgagcatccccctc
atcgatgatacggacgccgaggacgacgcccccaccaagcgcaacaacaacaacagcggc
aacaccgcctctcctagcccttcgcctactcctactcccacgcccctggccaccaccccg
ccgccaccctcgcccaaccagaacaataacgctgtggagagcagcctgcactttttcctg
gatgccggcagcggcaagcctcaggcctcgccgtcggcccccgccagccctctgcacagc
ctggagacctccctctga
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