Clupea harengus (Atlantic herring): 105899932
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Entry
105899932 CDS
T09045
Symbol
rbfox1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X6
KO
K14946
RNA binding protein fox-1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105899932 (rbfox1)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105899932 (rbfox1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
105899932
NCBI-ProteinID:
XP_012682615
Ensembl:
ENSCHAG00000021323
UniProt:
A0A6P3VVV4
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All DBs
Position
1:6198885..6429904
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AA seq
374 aa
AA seq
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MEGEGSRMVEQGNQDAPAPPETMAQPYPSAQFAPPQNGIPAEYTAAPHPHPAPDYPGQTP
VGEHALSLYPPAQTHSEQSGGPDASIQTVSGTATQTDDSAQTDSQQQTQSSENTENKTQP
KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFESSAEADRAREKL
HGTVVEGRKIEVNNATARVMTNKKPVNPYANGWKLNPVVGAVYSPEFYAVPGFPYPAATA
AAAYRGAHLRGRGRTVYNTFRAAAPPPHIPAYGGVVYQDGFYGADIYGGYAAYRYAQPAT
ATAAAYSDSYGRVYAADPYNHTLAPAATYSVGAMNAFAPLTDAKTRSHADDVGLVLSSLQ
ASIYRGGYSRFAPY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaagggagcaggatggtggagcagggtaatcaggacgccccagcgccgcca
gagaccatggcacagccttacccctccgcccagtttgcgcccccccagaatggcatcccg
gccgagtacacggcggcgccgcacccccaccctgccccagactaccccggccagaccccc
gtgggcgagcacgcgctcagcctgtaccccccagcacagacgcacagcgaacagagcggc
ggtcccgacgccagcatacagacggtctctggcacagccacacagacagacgattcagca
cagacagacagccagcaacagacacagtcgtcggaaaacacggaaaacaagacgcagccc
aagcggctccacgtctccaacatccccttcaggttcagagatccagacctcaggcaaatg
tttggccaatttggtaaaatcttagatgttgagatcatttttaatgagcggggctctaag
gggtttggtttcgtaactttcgaaagtagtgcagaagcggacagggcgagggagaaatta
catggcaccgtggtagaaggccgtaagatagaggttaacaatgcaacggcccgagtcatg
accaataagaagccagttaacccctatgcaaacggctggaagttgaatccagttgtgggt
gcggtctacagtccagaattctatgcagtgccaggcttcccttacccagcggccacggcg
gcggcagcatacagaggagcacatttaaggggcagagggcgtaccgtctacaacacgttc
agggcggccgcacctcccccccacatccctgcctatggaggtgttgtataccaggacggc
ttttatggtgcagatatttatggtggttatgctgcctacagatatgcccagcctgctact
gccaccgcagctgcctacagtgacagttacggacgagtttatgctgccgacccctacaac
cacacacttgctccagcagcaacatacagcgttggtgccatgaatgcatttgcacccctg
actgatgccaagaccaggagccatgcggatgatgtcggccttgttctttcttcattacag
gctagtatatatcgaggtggatatagccgtttcgcgccatattaa
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