Clupea harengus (Atlantic herring): 105901065
Help
Entry
105901065 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105901065
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105901065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-RING_5
zf-RING_6
U-box
Dermcidin
zf-RING_10
Fib_alpha
Y1_Tnp
Syntaxin-6_N
PRP1_N
Motif
Other DBs
NCBI-GeneID:
105901065
NCBI-ProteinID:
XP_031427078
UniProt:
A0A6P8FF58
LinkDB
All DBs
Position
7:19206288..19210864
Genome browser
AA seq
563 aa
AA seq
DB search
MAEAILKNSFNCSVCLDVLKDPVTIPCGHNFCMRCIEGHWDEEDYRRVYSCPLCKRTSTP
RPKLYKNNLFAEMVETFMGTRIQASPISSSYAGPGDVECDVCTGRKLKAVKSCLDCLLSY
CETHFKAHNDVNPRRKHKVTDATGQLQERICSHHEKVFEIFCRTDQSFICYLCMMDEHKG
HDTVTAAAERTDKQRQFRQTQRRFQQRIQEREKDLQELRKAVKTLESSAQTAVEDSERIF
TEMIRSIERRRAEVKELIRDQEKAEVSRAEGLLKQLEQEIAELKRRDAELEQLSHTEDHI
HFIKNFPSISDSPRSSPSMTFNQSFSFEAVKESVSGVKVQLEEKLDDIFRQEVVRISVSV
MNIQIIQSLEYADPELPVRRTNSNEILPPKNSCHFTLDPNTANRDLHLSEGNRRVERKVQ
PRSYPDHPERFDGLYQVLCREGVSGCCYWEVEWSGGWVNISVSYKSISRKGRGHVCVFGR
NDQSWSLILYSTNSSFWHNNKETKLPLVASSRIGVYVDHRAGTLAFYNVSDTMTLLHRVQ
TTFTHTLYPGFRFWASGSSVKLL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctattttaaagaattccttcaactgttcagtctgtcttgatgtgctgaag
gatccagtgactattccctgtggacataatttctgcatgaggtgcattgagggccactgg
gatgaagaggattatagaagagtctacagctgccccctgtgcaaacgcacctccactccc
agacctaaactttacaaaaataatctgtttgctgaaatggtggagacatttatggggacc
agaatccaagcttctcctatttcttcctcttatgctggacctggagatgtggagtgtgac
gtctgcactgggagaaaactcaaagctgtgaagtcctgtctggattgtctattgtcttac
tgtgaaactcacttcaaagctcacaatgatgtaaaccccagaagaaaacacaaggtgact
gatgccacaggccagctacaggagaggatctgctctcatcatgagaaggtttttgaaata
ttttgtcgaaccgatcagagttttatctgctatctgtgcatgatggacgaacataaaggc
catgacacagtcactgctgcagcagaacggacagacaaacagaggcagttcaggcagacc
cagaggagattccagcagagaatccaggagagagagaaggatctgcaggagctgaggaag
gctgtgaagactctcgagagctctgcacagacagcagtggaagacagtgagaggatcttt
actgagatgatccgctccattgagagaaggcgtgctgaggtgaaagagctgatcagagat
caggagaaggctgaggtgagtcgggctgaaggactcctgaagcaactggagcaggagatt
gctgagctgaagaggagagatgctgagctggagcagctttcacacacagaggatcacatc
catttcatcaagaatttcccgtcaatcagtgactctcctcgctcctcgcccagcatgacc
ttcaaccaaagcttctcttttgaggctgtgaaggaatctgtctctggagtgaaggtgcag
ctggaggagaaactggatgacatcttcaggcaggaagtagtcaggatatctgtatcagtg
atgaatatccagatcatccagtctttagaatatgctgatcctgaactcccagtcagaaga
acaaacagtaatgagattctgccaccaaagaactcctgtcacttcacactggatccaaac
acagcaaacagagacctccatctgtctgaggggaacaggagggtggaaaggaaagttcag
ccccggtcatatcctgatcatccagaaagatttgatgggttgtatcaggtgctgtgtaga
gagggtgtgtctggatgctgctactgggaggttgagtggagtggggggtgggttaatata
tcagtctcatataaaagcatcagcaggaaaggaaggggtcatgtgtgtgtgtttggacgt
aatgatcagtcctggagtctgatcctctacagcaccaactcctctttctggcacaataat
aaagagactaaactccctctagtggccagctccagaataggagtgtatgtggatcacagg
gcaggaactctggccttctacaacgtctctgacacaatgacccttctgcacagagtccag
accacattcactcacacactctaccctgggtttaggttttgggcttctggatcatcggtg
aagctgttgtga
DBGET
integrated database retrieval system
