Clupea harengus (Atlantic herring): 105901686
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Entry
105901686 CDS
T09045
Symbol
ncapd2
Name
(RefSeq) condensin complex subunit 1
KO
K06677
condensin complex subunit 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105901686 (ncapd2)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
105901686 (ncapd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
Cnd1_N
PDS5
Adaptin_N
HEAT_2
HEAT
Cnd3
Proteasom_PSMB
RTP1_C1
Nipped-B_C
Myb_DNA-bind_5
Imm70
Nup153
Motif
Other DBs
NCBI-GeneID:
105901686
NCBI-ProteinID:
XP_012684626
Ensembl:
ENSCHAG00000021974
UniProt:
A0A6P3W096
LinkDB
All DBs
Position
11:9638137..9662125
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AA seq
1410 aa
AA seq
DB search
MPAAMSWDFNLPVSVDDLVKAGGVGQYVVQDVLTPKELPSHLNRFKLALRNQGPLSILEH
FDTTYSVLQHWRTLDVAMKEETLELLIQVVRGLSVSLPSMLDSGALSSDDRKLQLNAVKM
GVFLLCKLTETLESDSYRQSIVTAPVKGGKKNKGGEGLMQWESEREVVLQCLSQLLQLDI
RSLWSLSLVEEEFVSCVTCCCYKLLENPTISHVKSKPTRDLIIHIIGVMIKKYNHMLGAR
VKVIQLLQHFEQLAGVCAQAVATWSTEFGVKAIAGEIMREIGQKSSEELSREGSGVKAFS
SFLSELSTLVPELMIPNISVILSHLEKESASMRVAVCEILGEVLVRILTGDRLEDSARAD
RDRFLDTLQEHMHDAHSNVRTHVLQVYARIVNSKALPLCRYTEVMELAVGRLGDKSVNVC
KSAIQLLAAFIAHNPYSGKLSSADLKKPLEKEAAKLKEMKDKMAEKSPVAVISAAELWSA
MEPELLQTARAHLEPDSEEEWDEEEEVTGEDEGSDRDTAIQIAQLLRDNKYRQAVRACIQ
AHGRFPDSKFFSGLSTLNTQAVMDALGHLFKGSEDEDEQPQDAAQLPPPPSSEEGQGAER
AKDGVDEGELKKQEMLVQYLRDTEGFALQVERAIAIINNMLYWKTTTVVQEAMQFCVTAY
EFSVANSLSGVRKMLPLVWSTDTAVKDAVVQAYRRLYLNPQGDNTRAKAQTLVDSLSELM
VDASLGTIQCLEEIVQEFFSNETALQVSVVQALWERFSGKRETTALHRRAAVLLLGMAAR
AEREVVLSNLDTLCSVALGESVTEDYLLARDTVITICNITDQIRLSKGAPFRLPQDHQLF
SCLTQAIADGVVLSDPHWQTFMEQAVRLIYFLAESPDQLCGHLLQRSARLLLEQATEAGP
ISQSDDTVVAQSQMEETIQSQGSSQDLKEPGQQVSCVSLAQLLALCGGVTFWQVSHLERS
VSAELRRRRGEREEKEEKGPTSKSKQDGNDSVEEELGLVGASAEDTEAELIRKICESELL
AEENLLCVFVPLLVRVCSSPGRYAHPQLTAAACLALSQYMMISPAACKEHIRLLFTILEK
SPLPIVRSNTIVALGDLTVRFPNILEPWTPNLYARLSDENASVRLTAITVLTQLVLKDVM
KVKGQVSEVAVLLLDPEPHIASLAINFFNELSNKDNAIYNLLPDIISRLSDPERGMKEED
FNTIMKQLFSYITKEKQTESLVEKLCQRFRTAKTERQWADLAMSLSLLSMCERGFKRLQE
CWECYSDKLTEAGVYQPLLSITAKLRRGAKPLFKAQVEEFEKKLTAVHTKGLENVENEEL
EAQSEEQSQTQLVKTPAPPRSTRKTRGRVKSTIPEESDLVTPKQKTGRRPRKVIVFSSDE
EEEDAVMEESETPKVTTPISRSSRRTRLRH
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgcgatgtcgtgggacttcaatttaccggtcagcgtggatgacctcgtcaag
gcgggtggtgtgggccagtacgtggttcaagatgttttaactccaaaagagctgccatct
catctcaacagatttaaacttgctctgcgtaaccagggcccactgagtatcctcgagcat
ttcgacacaacatacagcgtgttacagcactggcgaactctggacgtggcaatgaaggag
gaaactttggaattacttatacaagtggtcagaggcctgtcggtatccctgccctctatg
ctcgattctggcgctctctcatccgacgaccgcaagctgcagctcaacgctgttaagatg
ggcgtcttcctgctctgcaagttaaccgagaccctggagagtgattcttacaggcagagt
attgtcactgccccagtcaagggtggtaagaagaataaaggcggcgagggcctgatgcag
tgggagtcggagagggaggtggtgctgcagtgtctctctcagctcctgcagctggacatc
cgctccctctggagcctgtcactggtggaggaggagtttgtcagctgcgtgacgtgctgt
tgctataagcttctggagaatcctaccatcagccacgtgaagagcaaacctaccagagac
ttaatcatacacataattggggtcatgatcaagaaatacaaccacatgctgggagcacgc
gtgaaggtgatccagctcctccagcactttgagcagctggctggggtgtgtgcgcaggct
gtagctacctggagcactgagtttggagttaaagccatcgcgggagagatcatgagggag
attggtcagaagtccagtgaggagctgagcagagagggctctggggtgaaggccttctcc
agcttcctgtctgagctcagcaccctggtgcctgaactcatgatccccaacatcagtgtc
atactctcacacctggagaaagagagcgccagtatgcgcgttgctgtgtgtgagattctc
ggagaggtgctggtgcgcattctgaccggagaccgtctggaggattccgctcgggccgac
cgcgaccgcttcctggacacgctgcaggagcacatgcatgacgcccactccaacgtgcgc
acgcacgtcctacaggtctacgcgcgcatcgtcaacagcaaggctctgccgttgtgccgc
tacaccgaggtgatggagctggctgtgggccgtctgggtgacaagtctgtcaacgtgtgc
aagagcgccatccagctgctggcagccttcattgcacacaacccctacagcggcaagctc
agcagtgcagacctgaagaagcccttggagaaagaagctgccaaactgaaagagatgaag
gacaagatggcggagaagtcgccggttgctgtgatctcggctgctgaattgtggtctgcg
atggagccagagcttctacagacggccagagcccacctggaacccgacagtgaggaggag
tgggatgaggaggaggaggtcactggagaagatgagggcagcgaccgagacactgccatc
caaattgcccagctcctcagagacaacaagtataggcaggcagtgcgtgcgtgtattcag
gcccacggccgtttcccagactccaagttcttctctggcctctccaccctgaacacccag
gcagtgatggacgccctgggccatctgtttaaagggtcagaggatgaggatgagcagccc
caggatgcggctcagctgcctcctcccccctcctccgaggagggccagggcgcggagagg
gccaaggacggggtggacgagggcgagctgaagaagcaggagatgctggtgcagtacctg
agggacacggagggcttcgccctgcaggtggagagggccattgccatcatcaacaacatg
ctctactggaagaccaccacagtggttcaagaggccatgcagttctgtgtgactgcgtat
gagttcagcgttgccaactcgctgtcgggtgtgaggaagatgctgccgctggtctggtcc
acggacaccgcggtgaaggacgcagtggtgcaggcctacaggcgcctctacctcaatcct
cagggagacaacaccagggccaaagcgcagactctggtggacagcctgtccgagctgatg
gtggacgcctctctgggaaccatccagtgtctggaggagattgtgcaggagttcttcagc
aatgagactgctctgcaggtgtctgtggtgcaggcgctgtgggagaggttctccggcaag
cgggagaccacagccctgcacaggcgcgctgccgtcctgctgctgggcatggccgcacgg
gcggagagagaggtggtcctcagtaacctggacacactctgctcagtggctctgggggag
tctgtaacggaggattacctgctggccagagacacggtcatcaccatctgcaacatcacc
gatcagattaggctgtccaaaggagcccctttcaggctgcctcaggatcaccagctcttc
agctgcctcacccaggccatcgctgatggggttgtgctctccgacccccactggcagacc
ttcatggagcaggccgtgcgtctcatctacttcctggccgagtcacctgaccagctgtgt
ggccaccttctccagcgctccgctcgcctgctattggagcaggccactgaggctggacca
ataagccaatcagacgatacagttgttgcgcaatcacagatggaggagactatccaatca
cagggttcctcccaggacctgaaggaaccgggacaacaagtgagctgtgtgtctctggcc
cagctgctggctctgtgtgggggcgtgaccttctggcaggtgtctcacctggagcgcagc
gtgagcgccgagctccgcaggaggagaggagagagggaggagaaggaggagaagggaccc
accagcaagtctaagcaagacggcaatgacagtgtggaggaggagcttggcttggttggc
gcctcggcggaggacacagaggccgagctgatccgcaagatctgtgagtcggagctgctg
gcagaggagaatctgctgtgtgtgtttgtgccgctgctggtgagggtttgcagctcacca
ggccgttacgcccatcctcagctcaccgccgcagcctgcctcgctctctcccagtacatg
atgatcagccctgctgcttgtaaggagcacatccgtctcctcttcaccatcctggagaaa
tcccccctacccattgtgaggtccaacacaatcgttgccctcggcgacctcactgtgcgc
ttcccaaacattctggaaccctggactcccaacctctatgccaggttgagtgacgagaac
gcctcggtcaggctgacggccatcacagtcctcacgcaactggtgctgaaggacgtcatg
aaggtcaaaggtcaggtgagcgaggtggccgtgcttctgctggacccggagccgcacatc
gccagcctggcaatcaatttcttcaacgagctctccaacaaggacaacgccatttataac
ctgctgcctgacatcatcagccgcctttctgacccagagaggggtatgaaggaggaggac
ttcaacaccatcatgaagcaactgttctcttacataaccaaggagaagcagacggagagc
ctggtggagaaactctgtcagcgcttcagaacggcaaagactgagcgccagtgggcggat
ctggccatgtccctctccctgctctccatgtgtgaacggggcttcaagcggctgcaggag
tgctgggagtgctacagcgacaagctcactgaggccggcgtctaccagcccctcctgtcc
atcaccgccaagctgcgccgaggagccaaacccctgttcaaggctcaggtggaggagttt
gagaagaagctgacggcggtccacaccaaaggtctggagaatgtagagaatgaggagctt
gaggctcagagtgaagagcaaagccagacgcagctagtcaaaaccccagcacccccacgc
agcactcgcaagaccagaggtcgggttaaatccactattccggaggaaagtgaccttgtg
acccctaaacaaaagacaggccgacgccctcgtaaggtcatcgtcttcagcagcgatgag
gaagaggaggatgctgttatggaggaaagtgagactcccaaagtgaccacgcccatctct
cggtcctcgcggcgcactcgtctgcgccactga
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