Clupea harengus (Atlantic herring): 105901698
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Entry
105901698 CDS
T09045
Symbol
rbfox1l
Name
(RefSeq) RNA binding protein fox-1 homolog 1-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105901698 (rbfox1l)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105901698 (rbfox1l)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
105901698
NCBI-ProteinID:
XP_012684642
Ensembl:
ENSCHAG00000013284
UniProt:
A0A6P3VYD9
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All DBs
Position
11:10979339..10992161
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AA seq
389 aa
AA seq
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MLSSPTVILQPYGLPVYPQTASCYPGIVQGTPGQEAGPTGGDPNLPQVYAPPPSYPPPGQ
GPPTPAGRLPPLDFSPVHPGSEYQEHHQLRVFQGPHEGPDSLSANSVDDSLVPVTSDSQS
LSVSVQTGGGAGSGSDDEGSGKAQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFESAMEADRAREKLNGTIVEGRKIEVNNATARVVTKKPQTPLVNSTDQL
AATGWKMMGANPMMGAMYAPELYTVASFPYPMPTPTLSYRGPALRGRGRAVYNTIRSAAT
AAPTAVQAYPGVVYQDGLYGTEVYGGYPAAYRVAQSASAATAAAYSDGYGRVYASTTDPY
HHSVGPTTTYGVGTMASLYRGGYNRFTPY
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgctctcctcccctactgtgattcttcagccgtatggactccccgtctacccacagaca
gcctcctgctaccccggcattgtacagggtacccccggccaggaggcggggccaaccggt
ggtgaccccaacctccctcaggtgtacgcccctcccccttcctatcctccacctgggcag
ggccctcccacgcctgctggcaggctgccacccctggacttcagcccggtccaccccggc
tcagagtaccaggagcaccaccagctcagggtgtttcagggcccacacgaggggccggac
tccctctcagccaatagcgtggatgactccttggttcccgtcacctctgactctcagtct
ctgagcgtttccgtgcagacggggggtggagcaggaagtggaagtgatgacgaggggtct
ggcaaagcccagcccaaacggctccatgtctctaacatccccttccgatttcgcgacccc
gacctgaggcaaatgtttgggcaatttggcaagatcctggatgtggagatcatcttcaat
gagagagggtcaaagggcttcgggtttgtgacctttgagagcgctatggaggcagatcga
gctagggagaaactcaacggaaccatcgtggaggggaggaagattgaggtgaataatgct
acagccagagtagtcacaaagaagccccagactccgttggtgaacagtacggatcaactc
gctgccaccggctggaagatgatgggagccaacccgatgatgggagccatgtacgcgcct
gagctctacacagttgccagtttcccctatcctatgcctacgccaaccttatcctacaga
ggccccgccttacgagggcgtggtcgagcagtctacaacactattcgctcagctgcaaca
gccgcacccactgctgtccaagcctatccgggtgtggtgtatcaggatggcctgtatgga
accgaagtttatggaggctatcctgcagcatacagagtagcccagtcagcctcagcagcc
acggcagcagcctacagtgatgggtatggacgtgtgtacgcctctactacagacccctat
caccactcggttggaccaacaacgacttatggagttggaaccatggcaagcttgtacaga
ggaggatacaaccgcttcactccctactga
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