Clupea harengus (Atlantic herring): 105902287
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Entry
105902287 CDS
T09045
Symbol
pcgf5a
Name
(RefSeq) polycomb group RING finger protein 5-A
KO
K11489
polycomb group RING finger protein 5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105902287 (pcgf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105902287 (pcgf5a)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
105902287 (pcgf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-Nse
zf-RING_5
zf-RING_UBOX
zf-RING_10
zf-rbx1
zf-C3HC4_3
zf-RING_6
Etmic-2
RRN3
Prok-RING_4
TRAF3_RING
zf-C3HC4_5
zf-RING_16
DUF1272
Motif
Other DBs
NCBI-GeneID:
105902287
NCBI-ProteinID:
XP_012685293
Ensembl:
ENSCHAG00000016961
UniProt:
A0A6P8G615
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Position
13:complement(448704..457281)
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AA seq
237 aa
AA seq
DB search
MAAQRKYLVRDFNRYITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEESNECPQCGIQV
HETNPLEMLRLDKTLEEIIFKLVPDLREKEEQRELEFWRKTKSKGNGEDGPIPKKARLGD
DREEDDDGKGGDYHRSDPQMAICLDCLRNNGLSGESTVKGLIKKFIRCSTRVTVGTIKKF
LCLKLKLPSSYELDVLCNGEIMGKDHTLEFIYRTRWRLQEESAYPMVLEYRPRIDFG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccagaggaagtacttggtccgagactttaaccgctacatcacgtgctacctg
tgtcgaggctacttgatcaagcccaccacggtcacggaatgcctgcacaccttctgtaag
agctgcattgtccagcactttgaggagagtaatgaatgcccccagtgtggcattcaagtg
catgagaccaaccctttagagatgctaaggttggataaaacacttgaggaaatcattttc
aaacttgtgcctgacctgcgagagaaggaggaacagcgggagcttgaattctggaggaaa
acaaaatcaaaaggaaacggtgaagatggtcctatacctaagaaagcacggctgggtgat
gaccgcgaggaagatgatgatggaaaaggtggagactaccacaggagtgaccctcagatg
gccatttgtctggactgcttgcggaacaacggcctgtcaggagaaagcacagtaaagggc
ttaattaagaaattcatccgctgttccactcgggttaccgtgggaaccattaagaagttt
ctctgtctgaaactgaagttaccaagttcttatgagctggatgttctttgtaacggggag
ataatgggcaaagaccacaccctggagttcatctaccgcacacgctggagactacaagaa
gaaagcgcatatcccatggttctggagtatcgtccacgaattgactttggctaa
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integrated database retrieval system
