Clupea harengus (Atlantic herring): 105903745
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Entry
105903745 CDS
T09045
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105903745 (trappc8)
Membrane trafficking [BR:
char04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
105903745 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
105903745
NCBI-ProteinID:
XP_012686989
Ensembl:
ENSCHAG00000001395
UniProt:
A0A6P3W297
LinkDB
All DBs
Position
10:9668697..9703868
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AA seq
1527 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFPELLRPFCRLTSEGHLRDPNN
QLVTVRSLRICVTGISTRPPHTASVRAALANSVATSQPPDTVSANVITAGDYDLNISDRS
LKASVPWYSSWRDTLTQLSSSSHFTATTPWFEAYREIFLQSMPASEHEFLNHYLACMLVV
SSTEGVPLDQFLKLSQEQHKIQHSGDYTHPRWFIPNTLKYYVLLHDMSDGDEQRAESVYE
DMKQRYGSQVCYLLKINSRQGGAVGSEEQIPDPWSQYLQKTHPQEVFDDNASTNSVENDL
NNSEVEGGDAPAKDGLSNSLDEHPLQLDQSAEPALPALPRQGVGALDSMELQAPKSGGGG
GVGGGAAATSPAPSGTHGAWLTLTDHDRIRQFIQEFTFRGLLPHVEKNIRQLNDQLVSRK
GLSRSLFSATKKWFGGGKVPEKSISEMKNTAGLLYPPEAPELQIRKMADLCFLVQHYELA
YSCYHTAKKDFLSDQAMMYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDVCKNM
MLAERCALLSAEILKSQAKYSDAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVRK
FAFHMILAGHRYSKAGQRRHALRCYCQALQVYRGKGWSLAEDHINFTIGRQSYTLQQSDN
AAAAFRHILINDSQQSPTQQAAFLREYLYVYKSVNGSPGESDSECVLPQLPLPCLNSAQT
RVFFGHERRLAEGEKQAATHVTLDQECDVDLSRLWIRLEEQVVAMVNRGVVPSSFQPNQA
CLSQHTDNLRFPLAVVEEPIIVEVSFRNPLKVPLSLSDLSLLWKFTPKDFSRPPDDTDTS
SQSITNEKEAANAQTTPKNDVITAEVISEFSMSPEETRVARLKLLPHQTGELRILGVVYN
LGTGDSGNSSAEGLPLGGLSVCGRQYLEIQGPRLNQTKEEKTSVNHGQDHRLDPIIAPPM
PLLEVFFLQFPTALLCGELRKAWVEFVNVSGVPLAGLRVASTHPHFFTLGARGKDHARTP
LSPTASEHNSAYKTVSAPPSTVATVTLVSPAEFGGSGVGVSGGPEGMPTGGGSGCNSSSS
GVVEVELPGQALQPGEALQVPMWLRGPDTEGVHEIHFLFYYESTQKNGKLSHRVLRHTAV
ICAIRSLCVRATACRSNTLHVPQTHAPPAPAPHPAQPLSQDERSSSMLVFVDVENINTSE
VGVREFHIVQVSSSSRHWRLHTCINPAGDKDSKLGSRERGKLCFRASRCKPQQATSDVED
KLTFADLNLGNEQIVSSSTPCADFFFRRGPCPDQKKAAVVVAAAWGQYAAAPGSVADDNL
AVVKKCSEVELDLIVLWKAYVVEDNKQLILEGQLHVSLQTIGKEACSLTHREESQEMVLL
KFKPDPPPPLARPSQEQLSHLIKTCLQYPQTYQHPFPQQSLCMVPVTLMLSNCSLAQVDV
IIDLRHKSTSPESLDVCGVFVWLGQTQYKLQLAAQEVRCVRLRACFTQPGVYNLGTPRVF
AKLAHSTNMYETSQQSALPALIIINSV
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgttcagtcagttcaggagttcatccaggactccttcgtcccgatggtt
gccgtcttatgcagcgaagatgcagagaaagtcacccgcaaaaacaatctgaattttccg
gagctactgcggcctttctgccggctcacttctgaagggcacctgcgagaccccaacaac
cagctggtgacggtgcggagcctgcgcatctgtgtgacgggcatcagcacacgcccgccc
cataccgcctccgtccgcgccgccctcgccaattccgtggcaacaagccagccgcccgac
acagtcagtgccaatgtcatcactgcaggagactatgacctcaacatcagtgatcgctcg
ttaaaagcgagtgtgccctggtactccagctggagggacacactcacccaactcagctcc
agcagtcacttcacagctacgacaccctggtttgaagcatacagggagatcttcctgcag
tccatgcctgcgtctgaacacgagtttctcaatcactacctggcctgcatgcttgtggtg
tcgtcaactgagggggtgccgttggaccagttcctgaagctgtcccaggaacagcacaag
atccagcacagtggagattacacacacccacgctggtttatccccaacacactcaaatac
tacgtcctcctgcatgacatgagtgatggggacgagcaaagggcggagagtgtgtatgag
gacatgaagcagcggtatggttctcaggtgtgctacctgctgaagatcaactccagacag
ggaggagcagtgggctcagaggagcagatccctgacccatggagccagtacctgcagaaa
acacaccctcaggaggtgtttgatgataatgcatctaccaacagtgtagagaatgacctc
aacaactccgaggtggagggaggagacgcccccgccaaagatggcttgtccaacagtctg
gacgagcaccctctccagttggaccagtcggctgagcctgctctgcccgctctgcccagg
cagggggtcggggctctggacagcatggagttgcaggcccctaagtccggtggaggagga
ggagtcggaggaggagcagcagcaacttccccagcaccaagcggcactcatggggcctgg
ctcaccctcacggaccatgaccgcatccgccagttcatccaggagttcaccttcaggggc
ctgctgccccacgtcgagaagaacatccgacagctcaatgaccagttggtgtctcggaag
gggttgagtagatcattgttctcggccactaagaagtggtttggtggagggaaggtccct
gagaagagcatcagtgagatgaagaacactgctggactgctctatcccccagaggcgccg
gagcttcagattagaaagatggcggatctgtgcttcctggtgcagcactatgagctggcg
tacagctgctaccacaccgccaagaaggacttcctctccgaccaggccatgatgtatgct
gctggtgcactggagatggcggcggtctctgccttccttcaacctggagctcctagacca
tatccagctcattatatggatacagccatccagacttacagagatgtgtgcaagaacatg
atgctagctgagcgttgtgctcttctgagtgccgagattctgaagagtcaggcgaagtac
tctgatgctgctacactgcttatcaagatgactagtgaggactctgatttgcgaagtgct
ctgctgctggagcaggctgctcactgtttcattaatatgcgaaacccaatggtgcgcaag
tttgccttccacatgatcctggcaggacaccgctacagcaaagctggacagcggaggcat
gcgctgcgctgctactgccaagctctgcaggtgtatcgtgggaagggctggtcgctggca
gaagaccacatcaacttcaccatcggccggcagtcctatacactccagcagtctgacaat
gcggcagccgccttccggcacattctcatcaatgacagccagcagagtcccacccaacag
gccgccttcctcagggagtacctctatgtctacaagagcgtgaacgggtcgccaggggag
agcgactcggagtgtgtgttgcctcagctgcctctgccctgcctcaacagtgcacagaca
cgggtcttcttcggccacgagcgcaggctcgctgaaggtgagaagcaggcagcgacgcac
gtgacacttgatcaggagtgcgatgtagatctatcgcggctctggatccgattggaggag
caggtggttgccatggtgaatcggggcgtggtgccgtcctcgttccagcccaaccaggcc
tgcctcagccaacacacggacaacctccgattcccgctggctgtcgtcgaggaacctatc
atcgtggaggtgtctttccggaaccctctgaaggtgcctctaagtctgtccgacctttcg
ctgctatggaagtttacacccaaagatttcagcagaccgccagatgacacagacacctct
tctcagagcatcaccaacgagaaagaggccgccaacgcacagaccacaccgaagaatgac
gtcatcactgctgaggttatttccgagttcagcatgagtccagaagagaccagagtggca
cggttgaagttgttgccccaccagacaggagagttgcggattctgggtgttgtgtataac
ctaggcactggggactcgggaaacagctcagcagagggacttccgctgggaggactgagt
gtgtgtggcaggcagtatctagagattcagggcccgcgactcaaccagacgaaagaggag
aagaccagcgtgaatcacggacaagaccaccgcctcgacccaatcattgccccacccatg
cccctgctagaggtgttcttcctgcagtttcctacggcgctgctgtgcggtgagctgcgg
aaggcctgggtggagtttgtgaacgtgagcggcgtgcccctggccggcctgcgcgtggcc
tccacccacccgcacttcttcacgctgggcgcccgcggcaaggaccacgcccgcaccccg
ctctcgcccaccgcctccgaacacaactccgcctacaagacggtctcggcaccgccttcc
accgtcgccacggtcacgctggtgtcgccggccgagtttggcggcagtggagtcggggtc
agcggagggccagaggggatgcccactggaggtggtagtggctgcaacagcagcagcagc
ggagtggtggaggtggagctgcccggtcaggccctccagccgggggaggccctccaggtg
cccatgtggctgcgggggcctgacaccgagggcgtgcacgagatccacttccttttctac
tacgagagcacgcagaagaatggcaaactcagtcatagggtcctacggcacacggctgtc
atctgtgcgatccggtcgctgtgtgtgcgggccaccgcctgccgcagcaacactctgcac
gtgccccaaacacacgcgccaccggcaccggcaccacacccagcccagccacttagccag
gacgagaggagcagcagcatgctggtttttgttgacgtggagaacatcaacacaagtgag
gttggagtgcgtgagtttcacatagtgcaggtgtccagtagcagtcgtcactggagactc
cacacctgcattaacccagctggagacaaagactcaaagctggggagcagagagagggga
aagctgtgtttcagagccagcagatgcaaaccacaacaagctacctcagatgttgaagac
aaactcacttttgcagacctgaacttaggaaatgagcagatcgtgagctcctccactcca
tgtgcggacttcttcttccgccgaggcccctgtcctgatcagaagaaagctgccgtggtg
gttgctgcagcttggggacagtatgcggcggcgcctggtagtgttgccgacgacaacctg
gcagtggtgaagaagtgcagcgaggtggagctggacctcattgtcctgtggaaggcatac
gttgtggaagataataaacagctgatcctagagggccagctacatgtgtctctgcagact
attggcaaagaggcgtgctctctcacacacagagaggaaagccaggaaatggttctgctg
aagttcaagccagaccccccacccccactggccagaccctcacaggagcagctctctcac
ctaatcaagacctgcctgcagtaccctcaaacctaccagcacccctttccacagcagagt
ttgtgtatggttccagtcacgctgatgctgtcgaactgttcgctggctcaggttgatgtc
atcattgaccttcgacacaagtctaccagcccagagtctctggatgtgtgcggcgtgttc
gtgtggctgggtcagacgcagtacaagctgcagctggctgcacaggaggtgcgctgcgtg
cgtctgcgcgcctgcttcacccagccgggcgtctacaacctgggcacgccccgcgtcttc
gccaagctcgcccacagcaccaacatgtacgagaccagccaacagagcgccctgcccgcc
ctcatcatcataaacagcgtctaa
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integrated database retrieval system
