Clupea harengus (Atlantic herring): 105905472
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Entry
105905472 CDS
T09045
Symbol
ice1
Name
(RefSeq) LOW QUALITY PROTEIN: little elongation complex subunit 1
Organism
char
Clupea harengus (Atlantic herring)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JIP_LZII
Motif
Other DBs
NCBI-GeneID:
105905472
NCBI-ProteinID:
XP_012688932
UniProt:
A0A6P3W3G9
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Position
11:complement(22362569..22374724)
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AA seq
1536 aa
AA seq
DB search
MMPGENQAKTAGVAPDGTAGTCQNCAVLNETLHEYMTSFLALKQKIIETDKILNEFKEKC
DELQKTQRENTELHSHLDELLLNMAPFDSLHKDNVCMQEELQRTKGFLKRCRDGAADLRS
RDPEAPTLKDRIIFQLKILQDSNLKQSTEVTLLQKENKALEGKLQKTQEKLDKLEKEANK
EKMNTGVQTERKELCSTVVQTDVAERSSTAVQTNAIHKSSAVVQTDPTEESLMDLGKIRH
LVAGLWHSVQPQSLSETPLLPGSLMCRSPLVPSLSRSIVPVSKERLHMSPVRPSPATLPR
SSFRPPALRKESLLSADEILDLFRLLPPLLSPVHSPVDQRSGVDEDLQLSDEAEELHTFK
EEDMKEAAAAMAASVLLLSNGLKGSGHVCSPESPPEVKFQQSSPTATQDQTAQDQTTDRK
GEAVRLHISKNGKSKRSPAPTPATFEFPGKNEGCGEEKAAVDEVKESELERDEVMPSAEV
CSDLIADMEWDPSPVDSLSCRNKNRLEGAHSEGAHSDGVVEPPTDPHHSSGLDVANGDGL
SEAKVDNTEAEPSPLKNSPATLESVKDKEVVMMMCNGGLHEEQMSPLKPSLTDFDAKTLK
PQVKDQIMEIGKRCTGVALRSESLNGVQNAHDQNHNDVVNMVSSGGDRMDMMRIIVTMNS
GLRGRKQNPHNHIDDVVNSASRAELQNGQHQAPSDEIRNADVSKEACEGGGQKPSEDGCV
DTESSEDLDYLGLQRKVRVAHSRKETQQSAGSINGSSEKEESKSKPSKDLPGSTDIKTPT
PSPMAQGDVETRSDIMTEQNRSIDQSCSRIGDALTNGLNAPSALESQEDTQPEVEQQTPK
LRQRMQDQSSRHMQRDNSCVPRIETPNRPVLTNGTSTLRPFADGAVHTNGFGASDPPLEE
GGSYTRVKGLGESPRPVPMMSLAESLQSIRSMMGPPLPPLLLPLLGTPPKSVRLDHPSRP
ASGHVMARSTQDCSDHPAAMLSANTALRNGPQKISFSPATTTPSPCKGVPSPLQFGSATP
KHAVPVPCRHPVSTLNPMSPAAAPAQENSMQMLDSMYPELSAQARTLNILRGNVSLARPV
PEPSTPPQTAGSHMSSGFNSVATAFTKTQQTGKRAGNNVLLPKSAKKLRLGGSPVPVNTR
PPSDLAMELPQGGRESKDPQTRNGLHIVKNETIVQVDNTESSKECIISQALTTIGSSCFD
LLVVVKSHVSIKRISLVPILRDEEKEVVSDFCTKHKSLTEDFLSAILAQLKAERTTLGGD
HLQSLCRVYTALCRQNKDRLKANTLAYSLLKEDFQDAAKLILFMVTSWPSLLSCGSGLCK
AIHAVAHKRAEGEVLRCLTAYLHWDTNPPCGIPKLISSTLWTLRTRGEMQFQQHSRHGYD
LCSASWEYIFTLDLLCAYQKWMWTHDNVIRKELWPIMNAWVTQSRSQKGPIQDVTVATVL
KLIGRLGQQGIKEKYSTAVCKIATVINMFGRQAQSEGVPWEVQLAAAYAIYDLSPSNPKE
ALVALAEWRGEASEGVPPGITSCLTQISSLSRKVSP
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccggagagaatcaggcgaaaactgctggagttgctccggacggaacggctgga
acttgtcaaaactgcgctgtgttgaatgagacgctgcacgaatacatgacctcgtttttg
gcactcaaacagaagataatcgaaacggataaaattctgaacgagttcaaagagaaatgc
gatgagcttcagaaaacgcagagggaaaatactgaactacacagtcatctagatgagttg
ctcctaaacatggctccttttgacagcctacacaaggacaatgtgtgtatgcaagaggaa
ctgcagagaacaaagggctttctgaagcgatgccgcgatggtgcggcagacctgaggagc
agggaccctgaggccccgactttgaaggaccggatcatttttcaacttaaaattctgcaa
gactcaaatctcaagcaaagcactgaagtaaccttgctccagaaagaaaataaagccttg
gagggtaaactgcagaaaacacaagaaaagctggacaaactggaaaaagaagcaaataaa
gaaaagatgaacactggagtgcaaacagaaaggaaagagctatgcagcacagtggtacag
acagacgtggcggagaggagcagcacagctgtgcagacgaacgccatacataagagcagt
gcagtggtgcagactgaccctacagaagagagcctgatggatctagggaaaatcagacat
ctggtagcaggcctttggcacagcgtgcagccacagtcactctccgaaacacccctccta
cctggatccttgatgtgtcgctctccactggtgccatcattaagtcggtctattgttcca
gtatccaaggaacgtcttcatatgtcacccgtgcgtccgtctcctgccactttgccaaga
tcttctttcaggccacccgccctccgtaaggaaagccttttgtcagcggatgagattttg
gacttgttcagattgctgccgcctctactctcacctgtgcacagccctgttgatcagagg
agtggtgtggatgaagacttgcagttatcagatgaggcggaagaactccacacattcaag
gaggaagacatgaaggaggcggcggcggcgatggcggcatcggtgctgcttctctcgaac
ggcctgaaggggagcggtcatgtctgctcccccgagtccccccctgaggtgaagttccag
cagtcttcccccacggccacacaagatcaaaccgcccaagatcaaaccacagaccggaaa
ggagaagccgtccgcctccatatttccaagaacggaaagagcaaacggagtccggccccc
acgccagcgacgttcgagtttcctggtaagaatgaaggatgcggggaagagaaggcagcc
gttgatgaggtcaaggagtcagagctggagagggatgaggtgatgccttcagctgaggtg
tgcagtgacctcattgctgacatggagtgggacccctctcctgtggacagcttgtcatgt
aggaacaaaaacagactggaaggcgctcacagtgaaggcgctcacagtgatggtgttgtt
gagccgcctacagacccacatcatagctctgggttagatgttgcaaatggggacggactc
tcagaggccaaagtggataacactgaagctgaacccagtcctctgaaaaatagccctgct
acacttgagagtgtaaaggataaagaggtggtgatgatgatgtgcaatggtgggctgcac
gaggagcaaatgtcacctttaaaaccttctttgacagactttgacgccaaaactctgaaa
cctcaagtcaaagatcagattatggagatcggtaagagatgcactggtgtggccctgagg
tcagagtcgttgaatggggtacagaacgctcatgatcagaaccataatgatgtcgtgaat
atggtgtcttctgggggggacagaatggacatgatgagaatcatcgtgaccatgaattct
ggattaagaggacggaagcagaatccccacaatcatattgatgacgtcgtgaattcagct
tcgagagcagagctgcagaatggccagcatcaggcaccctctgatgagatcagaaacgca
gatgtgtctaaggaggcgtgtgaaggtggtgggcagaaaccctcagaggatgggtgtgtg
gacaccgagtcctccgaggacctggactaccttggtctccagcgcaaggtccgcgtggcc
cactcgcgaaaggagacccagcagtccgctggaagcattaacggctcctcggagaaggag
gaatcaaagtccaaaccctcaaaggatcttccaggtagcacagacattaaaacgccaact
ccaagtcccatggctcagggtgatgtggaaacccgttctgacattatgacagagcaaaat
agaagcattgatcagtcatgttcgaggataggagatgccttaacaaatggccttaatgct
ccttcggctctagaaagccaagaagacacgcagcctgaggtggaacagcagacgccaaag
ctacgtcagcgaatgcaagaccaatcctccagacacatgcaaagggacaactcctgtgtg
cctagaattgaaactccaaacaggcctgttctcaccaatggcacttccacactcaggccc
tttgcagatggtgccgtccataccaatggatttggagcctctgatcctccattagaagaa
gggggcagctacactagggtcaaaggcctgggggagtcccctcggccggttcccatgatg
tctctcgcagaatctcttcagagcattcgctcgatgatgggcccccctctcccccctcta
ctcctccctctgttggggacccctcccaagtccgtgagactggaccacccatcgagaccc
gcgtctggacacgtgatggcccgctcgacacaggattgctctgaccaccccgctgctatg
ctctccgccaacacagcactccggaatggcccccagaagatttccttctcccccgccacc
accaccccctccccctgcaaaggcgtgccctctcccctgcagttcggctcggccaccccc
aaacatgccgtgccggtcccctgcaggcaccccgtgtccacgctgaaccccatgtctccc
gccgccgccccggcacaagagaactccatgcagatgctggactccatgtacccagagctg
tcggctcaggctcgcacgctcaacatcctgcgcgggaacgtcagcctcgccaggcccgtg
ccggagcccagcacgcccccgcagaccgccggcagtcacatgtcatccggcttcaactcg
gtggcgacagccttcaccaaaacccagcagacagggaagagggccgggaacaacgtgctt
ttgccaaagagtgccaaaaagttacggttaggtggctcgcctgttcccgttaacacaagg
ccgccgtcagacctcgccatggagctcccacaaggcggcagggaatctaaagatccgcag
acccgaaacggcttacacatcgtaaagaacgagacgattgttcaggtggacaatacagag
agcagcaaagaatgtataatctctcaggcactgacaacaataggaagctcttgctttgat
ttgctggtagtggttaaaagtcacgtatccatcaaaaggatctcattagttcccatacta
agagatgaagagaaggaggtggtttccgatttctgcacgaagcataagtctttgacggag
gacttcctgtcggccattttggctcaactgaaggcagagcggacgaccttgggtggggat
cacctccagagcctctgtcgagtctatactgcactgtgccgccagaacaaggatcggctc
aaggcaaacaccctggcctacagtctcctgaaagaagacttccaggacgctgccaaactc
atcctcttcatggtgacctcatggcccagcctcctctcttgtgggagtggcctgtgcaaa
gccatccatgccgtcgcccataaaagggcagagggggaggtgctccgctgcctcaccgcc
tacctccattgggacacgaacccaccctgtggcatacctaagctgatcagtagcacactg
tggacactacggacaaggggggaaatgcagtttcagcaacacagtcgccatggttacgac
ctttgctctgcctcgtgggaatacatcttcactcttgacctcctgtgtgcctatcagaag
tggatgtggacgcatgacaacgtcatccggaaggagctttggcccataatgaatgcctgg
gtgacccagtcccggtcacagaagggcccaatccaggacgtgaccgtagccactgttctc
aaactgattgggagactggggcagcagggcataaaggagaaatactctacggcggtctgc
aagattgccacagtcatcaacatgtttggcagacaagcacaatcagaaggagtgccatgg
gaagtgcagttagcagcggcctatgccatatacgacctgtcgcctagcaaccccaaagaa
gcactggtggcactggcggaatggcgtggggaggcgtcagagggcgtgccccccgggatc
acaagctgcctcacacagatctcctcactcagcaggaaggtctcgccctga
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