Clupea harengus (Atlantic herring): 105905900
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Entry
105905900 CDS
T09045
Symbol
si:ch211-168k14.2
Name
(RefSeq) phospholipase D1 isoform X1
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00564
Glycerophospholipid metabolism
char00565
Ether lipid metabolism
char01100
Metabolic pathways
char04144
Endocytosis
char04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
105905900 (si:ch211-168k14.2)
00565 Ether lipid metabolism
105905900 (si:ch211-168k14.2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105905900 (si:ch211-168k14.2)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
105905900 (si:ch211-168k14.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105905900 (si:ch211-168k14.2)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
105905900 (si:ch211-168k14.2)
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
105905900 (si:ch211-168k14.2)
Endosome - Golgi transport
Others
Others
105905900 (si:ch211-168k14.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc
PLDc_2
PX
PH
Motif
Other DBs
NCBI-GeneID:
105905900
NCBI-ProteinID:
XP_012689408
Ensembl:
ENSCHAG00000017642
UniProt:
A0A6P3W4K7
LinkDB
All DBs
Position
2:21740736..21769907
Genome browser
AA seq
1095 aa
AA seq
DB search
MLTQRARQRPPPLERLESVMSQFSDSLDQYDLPDDADELDLSCHADRCDGKQMESGSIPF
RTIYHFLPFKSMDCAVFVEEVPVSVRVTDVERFTCTRVLNPNLYTIELSHGEFTWKIKRR
FKHFQALHQELIKFRALLRIPLPSRIHSVKRRSFKGHKRSQGGHIPTLPRRPDALVKEEQ
LVSRKMQLEDYLRNILKRSLYRNHPATLEFLEVSQISFIQDLGPKGIEGLILKKSGGNTF
PVCYWCGSNSVCYRWSKRWLVVKDSFLLYMRPEDGQVGTVILYDKGFHIKIGTRETGVRH
GVTLENLCRALTIKCSTYRQARWWGHSIDEFAQRYGQDFLRENRHGSFAPVRENTTTQWF
VNAASYFDAIAEALESAKEEIFITAWWLSPEIFLKRPVVDGNTWRLDCVLKRKAEQGVNI
CVLLYKEVEVILGLNSEYTKKTLTGLHSNIRVIRHPDHVPSTALLWAHHEKTVVIDQSLA
FLGGIDLAYGRWDDSQHRLTDVGSVRRSPQPSPGLSPTNPRLSTGTLGDGDEDLRYCLMG
YAAPCPDPRKGEAGGEQEAGGEAGAGAGLEELCLRVPTGCLQRVPSEERSRSGPEGPETK
PLSVRAGVMSRPVPPRDWYSKSLSLRSSESGSLGLGLPQSLPLPHETSSMRSYISNNELF
GETRFWHGKDYCNFILKDWVKLNKPFDDFIDRYKTPRMPWHDIGVAVHGKAARDIARHFI
QRWNFTKLVKKRSGATCYPFLMPKSLSAPMEPPSPSGRHTQASVQVLRSVCQWSIGTKVH
EESIHLAYISAIQNSKHFIYIENQFFISCADKNIHNCVGDALTERILKAYREKRRFRVYV
VMPLLPGFEGDISSGGGQAIKAIMYFNYRTMCRGEHSIMERLKRVMSDCWINYISFCGLR
THADLDGRLVTELIYVHSKLMIVDDCTVIIGSANINDRSMLGKRDSEMAVVVEDSEFQSS
VMDGDVYQAGKFALSLREECFRLVLGLLGDYSVDISDPVSDRFYKEIWMVTAAKNASVYD
KVFRCLPTDAVLNYKILRDYMTRPCLASEDPLQACEELRKVRGFLVQFPFYFLSEENLFP
SINSKEGIMPMELWT
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgcagagggccagacagaggcctccaccgctggagcgcctggagtcggtcatg
agccagttctccgacagcctagaccagtatgacctgccggacgacgccgacgagctggac
ctcagctgccatgctgaccgctgcgatgggaaacagatggagtcgggaagcattcccttt
cgcaccatatatcacttcctccccttcaagtccatggactgcgccgtgttcgtggaggag
gtgcccgtctcagtgagagtgactgatgtggaacggttcacctgcacaagggtgttaaac
cccaacctgtacaccattgagctgagccacggggaattcacctggaagatcaagcgacgc
ttcaagcacttccaggcccttcaccaggagctgatcaagttcagggccctgctcaggatc
cccctgccaagtcgcatacactcggtgaaaaggagatcgttcaaaggccacaagcgctcg
cagggaggacatattcccacgctaccccggaggcccgacgccctggtgaaagaggagcag
cttgtcagcagaaaaatgcagctagaggactacctgaggaacatactgaagaggtctttg
tatcggaatcatccagcaacacttgaattcctggaagtgagtcagatctcatttatccag
gacctgggaccaaagggaatcgaaggcctgatcttgaagaagtccgggggaaacacattt
cctgtgtgttactggtgtggctccaacagtgtgtgttatcgctggtccaaaagatggctg
gtggtaaaagactcttttcttctctacatgaggcccgaggatggccaagtggggacagtg
atcctctacgataaggggttccacatcaaaatcgggacccgcgagactggagtcaggcac
ggggtaaccctcgagaacctttgcagggcgctcaccatcaagtgctccacgtacaggcag
gcccgctggtggggtcactccattgacgagtttgcacagaggtacgggcaggacttcctc
agggagaaccgccacggctccttcgcccctgtcagagagaacacaacgacacagtggttt
gtcaatgctgccagctacttcgacgccatcgcggaagccctggaaagtgccaaggaggag
atattcatcacagcctggtggttgagtccagaaatcttcctgaagagacccgtggtcgat
gggaacacctggagattagactgcgtcttgaaacgcaaagcggaacaaggggtgaacatc
tgcgttcttctctacaaagaggtggaggtcatccttggcctgaacagtgaatacaccaag
aagaccctgactggccttcactccaacatcagggtcatcaggcacccggaccacgtgccc
tccacggccttgctatgggcccaccacgagaagacggtggtgatcgaccagtcactggcc
ttcctcgggggcatcgacctggcctacggccgctgggacgactcccagcaccggctcacc
gatgtggggagtgtgaggaggagcccccagcccagccctggcctctcgcccaccaacccc
cggctctccacagggactcttggggacggggatgaggatctgaggtattgccttatgggt
tacgctgccccctgccctgacccacggaaaggagaggcaggcggggagcaggaggctgga
ggagaggccggcgctggagccgggctggaggagctgtgtctgagagtgcccacgggttgc
ctccagagggtcccctcagaggagaggagtaggagtggccctgagggaccagagaccaag
ccgctgagtgtgagggctggcgtgatgtccaggccggtgcctcccagagactggtacagc
aagagcctgtctctccgctccagcgagtccggctcactgggcctgggtctgccccaatcc
ctccccctgccacacgagaccagctcaatgagaagctacatcagcaataacgagctgttt
ggggagaccagattctggcacggcaaagattactgcaactttatcctcaaagactgggtc
aagctcaacaagccatttgatgacttcatcgacaggtacaaaacgccgcgaatgccgtgg
cacgatattggagtcgcggtccatggaaaggcggcaagagacattgctaggcatttcatc
cagagatggaatttcaccaagttggtgaaaaagcgctcaggggccacctgctacccgttt
ctgatgcccaagtccctgtccgcccccatggagcctccctcacccagcggccgacacacg
caggccagtgtgcaggtcctgagatcggtgtgccagtggtccatcggcaccaaggtccac
gaggagtccattcacctggcctacatatcagccatacagaacagcaaacacttcatctac
attgagaaccagttcttcatcagctgtgctgataaaaacatccacaactgcgtcggagac
gcgctcaccgagagaatcctcaaagcatacagggagaagaggaggttcagggtgtacgtg
gtgatgccgctgctgccgggcttcgagggagacatctcatcagggggggggcaggccatc
aaggcaatcatgtactttaattacaggaccatgtgtcgtggcgagcactccatcatggag
agactcaaacgtgtgatgtctgactgctggatcaactacatctccttctgcggtcttcgc
acccacgctgacttggatggcaggctggtgacggagctaatctatgtgcacagcaagctc
atgatcgtggatgactgcactgtcatcataggctcggccaacatcaatgaccgcagcatg
ctgggaaagcgtgacagtgagatggccgtggtggtggaggactcggagttccagtcctct
gtcatggatggagacgtgtaccaggccggcaagtttgctctgtccctccgagaagagtgc
ttcaggctggtgctggggctactgggggactacagtgtggacatcagtgatccggtcagc
gaccgcttctataaagagatatggatggtgacggcagccaagaatgccagtgtgtatgac
aaggtgttcaggtgcctgcccactgacgcggtgctgaactataagatcctgcgggactac
atgacccggccctgccttgccagcgaagacccactccaggcctgcgaggagctccggaag
gtccgtggcttcctggtgcagttccctttctacttcctgtccgaggagaacctcttcccc
tccatcaactccaaagagggcataatgcccatggagctgtggacatag
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