Clupea harengus (Atlantic herring): 105906487
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Entry
105906487 CDS
T09045
Symbol
smad3a
Name
(RefSeq) mothers against decapentaplegic homolog 3a isoform X2
KO
K23605
mothers against decapentaplegic homolog 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04068
FoxO signaling pathway
char04110
Cell cycle
char04144
Endocytosis
char04218
Cellular senescence
char04310
Wnt signaling pathway
char04350
TGF-beta signaling pathway
char04371
Apelin signaling pathway
char04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
105906487 (smad3a)
04350 TGF-beta signaling pathway
105906487 (smad3a)
04371 Apelin signaling pathway
105906487 (smad3a)
04068 FoxO signaling pathway
105906487 (smad3a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105906487 (smad3a)
09143 Cell growth and death
04110 Cell cycle
105906487 (smad3a)
04218 Cellular senescence
105906487 (smad3a)
09144 Cellular community - eukaryotes
04520 Adherens junction
105906487 (smad3a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
105906487
NCBI-ProteinID:
XP_012690094
Ensembl:
ENSCHAG00000024368
UniProt:
A0A6P3W5E9
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All DBs
Position
6:complement(21396960..21421692)
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AA seq
425 aa
AA seq
DB search
MSILPFTPPIVKRLLGWKKGEQNGQEEKWCEKAVKSLVKKLKKTGQLDELEKAITTQNIN
TKCITIPRSLDGRLQVSHRKGLPHVIYCRLWRWPDLQSHHELRAVDLCEFAFHTKKDEVC
VNPYHYQRVETPVLPPVLVPRHTEIPAEFPPLDDYIHSIPENTNFPAGIEPQSNYIAETP
PPGYISEDGETSDHPMSHSMDTGSPNLSPSPVSPTQNNLDLQPVTYCEPAFWCSISYYEL
NQRVGETFHASQPSLTVDGFTDPSNSERFCLGLLSNVNRNAAVELTRRHIGRGVRLYYIG
GEVFAECLSDSAIFVQSPNCNQRYGWHPATVCKIPPGCNLKIFNNQEFAALLAQSVNQGF
EAVYQLTRMCTIRMSFVKGWGAEYRRQTVTSTPCWIELHLNGPLQWLDKVLTQMGSPSIR
CSSVS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttaccctttacacctccgattgtgaaaagacttttgggttggaaaaaggga
gagcaaaatggacaggaggagaaatggtgtgaaaaggctgtgaagagtcttgtgaagaaa
ctgaagaagacgggacagctggacgaactggagaaagccatcacaacacagaacatcaac
accaagtgcatcaccataccgaggtctctagatggccgcctgcaggtgtcccaccggaag
ggcctgccgcacgtcatctactgccgcctgtggcgctggcccgacctgcagtcgcaccac
gagctgcgcgccgtcgacctgtgcgagttcgccttccacacgaagaaggacgaggtgtgc
gtcaacccctaccactaccagcgcgtggagaccccagtgctgcccccagtgctagtgccc
cggcacaccgagatccccgccgagttccccccgctagacgactacatccactccatccca
gagaacaccaacttccccgccggcatcgagccgcagagcaactacatcgcagagactccc
ccacctggctacatcagtgaggacggggaaaccagtgaccatcccatgagccacagtatg
gacacaggctcaccaaacctttcaccgagcccagtgtctccaacgcagaacaacttagac
ctccagccggtgacgtactgcgagccggccttctggtgctccatctcctactacgagctg
aaccagcgcgtgggcgagaccttccacgcctcgcagccctcgctgacggtggacggcttc
accgacccgtccaactcggagcgcttctgcctgggcctgctgtccaacgtcaaccgcaac
gccgcggtggagctcacgcgtcgccacatcggccggggagtgcgtctgtattacatcggc
ggagaggtgtttgccgagtgcctcagtgacagcgccatcttcgtccagagtcccaactgc
aaccagcgctacggctggcaccctgccacagtctgcaagatccccccaggttgtaacctg
aagatcttcaacaaccaggagtttgcagcactcttggcccagtcggtgaaccagggcttt
gaggctgtctaccagctgacccgtatgtgcaccatacgcatgagctttgtcaagggctgg
ggcgcagagtacaggcgtcagacggtgaccagcaccccctgctggatcgagctgcacctc
aacgggcccctccagtggctggacaaggtgctcactcagatgggctcccccagcatccgc
tgctccagcgtgtcataa
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