Clupea harengus (Atlantic herring): 105906951
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Entry
105906951 CDS
T09045
Symbol
fyco1b
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105906951 (fyco1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105906951 (fyco1b)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105906951 (fyco1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
GOLD_2
REST_helical
Motif
Other DBs
NCBI-GeneID:
105906951
NCBI-ProteinID:
XP_031415541
Ensembl:
ENSCHAG00000009510
UniProt:
A0A6P8ETI2
LinkDB
All DBs
Position
22:complement(18572453..18593660)
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AA seq
1437 aa
AA seq
DB search
MASISVGENQLQRIIRDLHDAVAELSKEHRETGEPVTDDSSSLHKFSYKLEYLLQFDQKE
KTTFLGTRKDYWDYFCDCLAKLKGANDGIRFVKSILELKTSLGKGRAFIRYSLVHQRLAD
TLQQCLMNHKVTSEWYYARSPFLKSHLSIDIINHLYELNEIQFDVASRGHDLDSDWPTFA
RRTLGTPAHLWRPPSRCSSVNSLVSSYSQQPSEFLPGPDFSPCLLGELGELSHISSCSAA
DDLRVELDQSELRQQELLERVRVLSKEAGDLKAVIRDLEGQLPSAGGIGQKRQPPQHLQQ
QQQQQQRGASILSGRQEVAQHQQAEESKANGEFVNHLQADVREGSEVISVREASESNLQA
KLSLAEKRNMELLTKLDGALTDKSQQAASYCDSAWKIQELLAKLKEAEAERLEARGKSEE
QGDHAQRLAQELRLQEQSLQESRERLVEAEEERGTSLQQAEELRATVGRLQGALSLKERE
TGNLRTQLQDLQQGLEARERQAEAARRNAQGERGALQQRNHNLKEEPEHNKARDAQPEIT
TGTSTGTNVNSSTNAGAKKDPTAKKVEDYKAQCTTLMELNAKLLQTVKRNEESTRELAQA
RQAAERELAALRASEKQLRAHLEAAQLPLEEQERRLLEENQQLEDSVKRALMRAEEAEEE
VRRLEKDREEHREEKAEVKEQLASAREELSTLTAQATELEKNLAASRENQEELQRQLEET
ERRSTERPVECEEGRREGEVGARQTSRLALAEAQLELHTREVLRLQEDAVGLRVQLQVST
EERLKTQALQEVTESSREDLRAQAEQLKAQVEELNRRHVEELLRGREREEALARERDSEA
RERAVLAAEASGLREEHGMLKRRLDKLAVENAEAREALHRANTETAELGVHVCMLTGQNE
EARLRWERLSGRLSEMEEEGNREARSHNTSLEALQEENDKLQEELRQAQALPSSLQESQR
EIQDLKLQLSSEASEHDTKLQAVTEELVSMRSQLENGQQQVAALETKMEELETMNQNSSE
VVEEKNTHIASTQTVLHQKEEEERKLRKELSTAEEQLALAQKACQDLSESLRRTTLERQS
SDLKTSAEIDDLYRTKRNLEERLIELIRDKDALWQKSDALEFEQKLREEQTDRELSHCLG
CHSQFSWWLRKHNCRLCGRSFCYYCCSNTVSTQQGGTRERCCKDCYTQHSAVVERHPQEE
LGTPPYPPFNPLTPPSSAVPGVRVAEQSPRPDDAVFDIITEEEVNCIYDSDSLSYTTACS
SERGRQGADELNSSNSAGDTTTEESEEIITAVQDAELCLLKSGELTLSVPFSVDEIAQFG
DEFRELFVKSSCYSIIPIAIGNAGPTISWVFSSEPKSITFSMVYRDSTDIPLEQAKVMIP
LTRCNSHKETIQGQLKVRNPGHYTLIFDNSFSRFISKKVLYRLSVEKPVIYDGSDCP
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggcatctatttcggttggagaaaatcagctgcagaggatcatcagagatctacatgat
gctgtggctgagctcagtaaggagcacagggagacaggggagcccgtcacagacgacagc
tccagcttacacaagttctcctacaagctagagtacctgctgcagtttgaccagaaagag
aagacgacttttcttggcaccaggaaagactactgggattatttctgtgactgtttggca
aagttaaaaggggctaatgacggcatccgcttcgtcaagtctatccttgagctcaagaca
tcgctggggaaaggccgggccttcattcgctactcactggtgcaccagaggttggccgac
accctgcagcaatgtctgatgaaccacaaagtcaccagtgagtggtattatgctcgcagc
ccgttcctaaagtctcacctgagcattgacatcatcaaccacctgtacgagctgaatgag
atccagttcgatgtggcttccaggggtcatgatctagactccgattggcctacatttgcc
agaaggacactggggacacctgcccacctgtggagaccacccagtcgctgctccagcgtc
aacagccttgtcagcagctactcacagcagccctctgagttcctcccggggccagacttc
agcccgtgcctcctgggcgagctgggcgagctgagccacatctccagctgcagcgcggcc
gacgacctgcgcgtagagctcgaccagtccgagctgcggcagcaggagctgctggaacgc
gtgcgcgtgctgagcaaggaggccggcgacctgaaagcagtcatccgcgacctcgaggga
cagctgccgagcgccggaggcatcggccagaagaggcagccgccgcaacatctgcagcag
cagcagcagcagcagcagcgtggagccagcattttgagcggtcggcaggaggtcgcacag
caccagcaagcggaggagagcaaggccaacggggagtttgtgaaccacctccaggctgac
gtgcgggaggggtcagaggtcatcagcgtcagggaggcgtccgagagcaacttgcaagcc
aaacttagcctcgccgagaagagaaacatggagctcttgaccaagctggatggagctctg
actgacaagagccagcaggcagccagctactgcgactcggcctggaaaatccaggagctg
ctggccaagctgaaggaggccgaggcagagcggcttgaggcccgagggaagagcgaggag
cagggggatcatgcccagcggctggcccaggagctccggctgcaggagcagagcctgcag
gagagccgggagcgtctggtggaggcggaggaggagcgtggcacgtcgctgcagcaggcc
gaggagctacgcgcgacagtgggccgtctccagggggcgctgtctctgaaggagcgcgag
acggggaacctgcgcacgcagctgcaggacctgcagcaggggctggaggcacgagagagg
caggccgaagcggcgagaaggaacgcgcagggggagcgcggggcactgcagcagaggaac
cacaacctgaaggaggagccggaacacaacaaggctcgcgatgcccaacccgagatcacc
accggcaccagtaccggtacaaatgtcaactccagcacaaacgccggtgccaaaaaggat
cccacggctaagaaggtggaggactacaaggcccagtgcaccacactgatggagctgaat
gccaagctgctgcagactgtgaagaggaacgaggagagcacccgggagctggcccaggcc
cgtcaggcggcagagcgggagctggccgccctgcgggcctcagagaagcagctgcgggcc
catctggaggcggcccagctgcccctagaggagcaggagaggaggttgctggaggagaac
cagcagctggaagacagtgtcaagcgggccctgatgagggcggaggaggctgaggaggag
gtgcgtaggctggagaaggacagggaggagcatagagaggagaaggcggaggtgaaggag
cagctggcgtcagcacgagaggagctgagtacgctcacagcacaggcgaccgagctggag
aagaaccttgcagcctccagggagaaccaggaggagctgcagaggcagctagaggagact
gagaggaggagcactgagaggcctgtggagtgtgaggagggaaggagggaaggagaggtg
ggggctaggcagacatccagactggccctggcggaggcgcagctggagctgcacacgcgg
gaggttctgcgtctgcaggaggacgcggtggggctgcgggtgcaactgcaggtgagcacg
gaggagcggctgaagacgcaagcgctgcaggaggtgacggagtcgtcgcgtgaggatctg
cgtgcccaggccgagcagctgaaagcgcaggtggaggagctcaaccggcggcacgtggag
gagctgctgcgcgggcgcgagcgcgaggaagcactggcgcgggagcgggacagtgaggcg
cgggagcgggcggtgctggcggccgaggccagtgggctgcgcgaggagcacggcatgctc
aagcggcggctggacaagctggccgtggagaatgctgaggcgcgcgaggccctccaccgc
gctaacaccgagacggccgaactgggcgtgcatgtgtgtatgctgacgggacagaacgag
gaggcgcgcctgcgctgggagagactctccgggaggctcagtgagatggaggaggagggc
aacagggaggcgcggagccacaacaccagcctggaggccctccaggaggagaatgacaag
ctgcaggaggagctgaggcaggcccaggcgctcccctcaagcctgcaggagagccagagg
gagatccaggacctgaagctccagctcagtagcgaggcctcagagcacgacaccaagctc
caggccgtcacagaggagcttgtgagtatgagatcacagctggagaacggacagcaacag
gttgcagctcttgagactaagatggaggaactagagacaatgaaccagaacagcagtgag
gtggttgaggaaaaaaatacccacattgccagtacccagactgttcttcatcagaaagag
gaagaagagaggaaactgagaaaagaattatctacagctgaggagcagttggcgttggcc
cagaaggcctgtcaggacctgagtgagagtcttcgccgcaccaccctggagaggcagagc
agcgatctgaagacgtcggccgagattgatgacctgtaccgcaccaagaggaacctggag
gagaggctcatcgagctcatcagggataaagacgcgctgtggcagaagtcggacgcactg
gagtttgagcagaagctgcgcgaggagcagacggaccgcgagctgagtcactgcctaggc
tgccacagccagttcagctggtggctacgcaaacacaactgcaggctgtgcgggcggtcc
ttctgctactactgctgcagtaacacggtgagcacccagcagggcgggactcgcgagcgc
tgctgcaaggattgctacactcagcacagcgccgtggtggagcgccacccgcaggaggag
ctgggcacgccgccctaccctcccttcaaccccctcaccccacccagctccgccgtgccc
ggcgtcagagtggctgagcagtctcccaggcctgatgacgccgtgtttgacattataact
gaggaggaggtgaactgtatctatgacagcgactccctctcctacaccaccgcctgctcc
tctgagagaggacgacagggggcagatgagctgaacagtagcaacagtgcaggggacacc
accactgaggagtctgaggagatcattacagctgtgcaggatgctgagctgtgcctgctt
aagtctggagaactcacgctgtcagtccccttcagtgttgatgagatcgcccagtttgga
gacgagttccgggagctcttcgtcaagtccagctgctacagcatcatccccatcgccatt
ggcaacgccggtcccactatcagctgggtgttttcctccgagcccaagagcatcaccttc
agcatggtgtatagagacagcactgacatccccctggagcaggccaaggtgatgatccct
cttacgagatgcaactcacacaaggagaccatccagggccagctgaaggtcagaaaccca
gggcattacactctcatctttgacaactccttctccaggttcatctcaaagaaagtgctt
taccgcctgtctgtggagaaaccggtgatctacgacggcagtgactgtccctaa
DBGET
integrated database retrieval system
