Clupea harengus (Atlantic herring): 105907598
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Entry
105907598 CDS
T09045
Name
(RefSeq) chondroitin sulfate synthase 2-like
KO
K00747
chondroitin polymerizing factor [EC:
2.4.1.175
2.4.1.226
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
char01100
Metabolic pathways
Module
char_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
105907598
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105907598
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
105907598
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
105907598
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
105907598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
Motif
Other DBs
NCBI-GeneID:
105907598
NCBI-ProteinID:
XP_012691415
Ensembl:
ENSCHAG00000002060
UniProt:
A0A6P3W7H1
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All DBs
Position
21:7366353..7378434
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AA seq
774 aa
AA seq
DB search
MRFSMLISLIRPIGPVIVGISLGFTLSLLSVTWVDESCDSDGIAASEDILLGQPGSLKGA
RKPSSISTSTTENGDAEEDFEPRIVPYTKPAQPSQSKKVFRAKYASTELGIRERLFVGVL
TSKTTLSSLGVAVNRTLNHHLDGRLAFFTGARNRKVPHGMLVISHGDERPVVGMFQTVNF
LLEHHVDDYDWFFLVQDDVYTQPDRLKALVDHLSMRRELYMGHPEEFIGGEGQGRFCSGK
AGYLLSRALLLKIKPFLDHCRNDIVSVRPDEWLGRCIIDYTSTNCMDELEGVQYNHFVLE
PGFDLSQEESGAFRNALSVHPVSKPDQMYRLHKHFTEIELQRTYEEIEKLQAEIKNVSEV
AVDGNRSALWPVGVSPPFEPKSRFEVMRWDYFTEDQLYTCADGSPKCPLEGADRLDVDDV
IQTAVAELNRKYSPTLRLSKQRLVNGYRRFDPTRGMEYTLDLQLEARTEAGHSGPLSCRV
HLVRPLSQVEIIPMPYVTEATRVHVLMPLVSDESSVALHFLDLYASNLFETADNAVLTFL
FIYDPLEAQRVSQSDVFGEVKAKVAAYERKYPSVKVPWISVKTESPALLRVLDIVSRKHP
VDTLFFLATPDTVVTTEFLNRCRMNAISGWQAFFPMHFQDYDPKVAYHDQPPPASPDLVR
EAGQFDRYAFDEACFYNADYMAARTHMAGDTQENRDNDDLLETLDVYDVFVRYSGLHVFR
AVEPALHQRYRNRTCNPRLSEESFHRCVQSTLEGVGSRSQLAMLLFEQEPGNST
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagattctcgatgctgatctctctcatcaggccgatagggccagttattgtcggtatc
tcgttgggattcaccctgagtttgctcagcgttacttgggtggacgagtcctgcgattcg
gacgggattgctgcctcggaagacattttgctgggccagccgggaagtctgaagggagcc
cgaaaacctagctcgatctccaccagcaccactgaaaatggggacgccgaggaggacttc
gagccgagaatagtgccttacacgaagccagcccagccaagccagtccaagaaagttttc
agggccaagtatgccagcacagagctgggcattcgggagcgtctcttcgttggagtcctc
acctccaagactacgctgagctccctgggagtggctgtcaaccgcaccctgaatcaccac
ctggacggccgcctggctttcttcaccggggcccgcaaccgcaaggtgccacacggcatg
ctggtgatctcccacggcgacgagcgcccggtcgtcggcatgttccagacagtcaacttc
ttgctggagcaccacgtcgacgactacgactggttcttcttagtccaggacgacgtctac
acccagccggaccggctcaaggctctggtggatcacctcagcatgaggcgcgagctctac
atggggcacccggaggagttcatcggcggggagggacaggggaggttctgcagcgggaag
gcgggatacctgctctcgcgggctctcctcctcaagatcaagcccttcctggaccactgc
cgcaatgacatcgtcagcgtcaggccggacgagtggctcggccgctgcatcatcgactac
accagcaccaactgcatggacgagctggagggtgtgcagtacaaccattttgtgttggag
ccaggctttgatctgagtcaagaggagagcggagctttccggaatgccctgtccgtccac
cctgtgtccaagcctgatcagatgtatcgtctgcataagcacttcactgagatcgaacta
cagaggacctatgaggagattgagaaactacaggcggagataaagaacgtgagtgaggtg
gccgtggatggaaaccgcagtgcactgtggcccgtcggtgtgtcacctcccttcgagcct
aagtcgcgcttcgaggtcatgcgctgggactactttactgaggaccagctctacacctgc
gctgatggctcgcccaagtgtccactagagggcgccgaccggctggacgtggacgacgtc
atccagacggccgtggccgagctgaaccgcaagtactctccgacgctgcgcctgtccaaa
cagcggctcgtcaacggctaccgccgcttcgacccgacgcgcggcatggagtacactctg
gacctgcagctggaggcgcgcactgaggctgggcacagcggcccgctctcctgccgcgtg
cacctggtgcggccgctcagccaggtggagatcatccccatgccctacgtgacggaggcc
acgcgggttcacgtgctgatgccgctggtcagtgacgagagctccgtggcgctgcacttc
ctcgacctgtacgcctccaacctgtttgagacggccgataacgccgtgctcaccttcctg
ttcatctacgacccgctcgaagcccagcgcgtcagccagagcgacgtcttcggcgaggtc
aaggccaaggtggccgcctacgaacgcaagtacccgtctgtcaaggtcccctggatcagc
gtgaagacggagagcccggccctgctgcgcgtgctggacatcgtctcgcggaaacacccc
gtggacacactcttcttcttggccacgccggacacagtggtcaccaccgagttcctcaac
cgctgccggatgaacgccatcagcggctggcaggccttcttccccatgcacttccaggac
tacgaccccaaggtggcgtaccatgaccagccacccccagcctctccggacctggtgcgc
gaggccgggcagtttgaccggtacgcgttcgatgaggcctgcttttacaacgcagactac
atggctgccaggacacacatggctggagacactcaagagaacagggacaacgacgatctt
ctggagacactggacgtgtatgatgtgtttgtccgctactccggcttgcatgtattccgc
gctgtggaaccggctttgcaccagcgctaccggaaccgcacctgtaacccgcgcctgagc
gaggagtcgttccaccgctgcgtccagagcacgctggagggtgtgggctcacggtcgcag
ctggccatgcttctatttgagcaggagccaggaaacagcacctga
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