Clupea harengus (Atlantic herring): 105907629
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Entry
105907629 CDS
T09045
Name
(RefSeq) homeobox protein Hox-C9
KO
K09294
homeobox protein HoxB/C/D9
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105907629
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
105907629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hox9_act
Homeodomain
Homeobox_KN
CI-B14_5a
Motif
Other DBs
NCBI-GeneID:
105907629
NCBI-ProteinID:
XP_012691451
Ensembl:
ENSCHAG00000016356
UniProt:
A0A6P3W765
LinkDB
All DBs
Position
5:11944740..11950057
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AA seq
261 aa
AA seq
DB search
MSTTGPISNYYVDSLINHESEEVLATRFSAPELLPAGSRPSPLVPECSDFPSCSFAPKPP
VFTSSWGPVHSQSSVVYHPYTHPPHLSTDSRYVRSWLEPISGTVSFPGYPANSRHYGLKP
DAIPERRPGDCIAANGRGYPDYYYGSSPDLRDKTQQIIPSPEAEALVSGKLKEDKPEFDP
NNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIW
FQNRRMKMKKMNKEKTESNEQ
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccacgggtcctataagcaattattatgtggattcgttgataaaccacgagagc
gaggaagtattagcgacgcgtttctccgcgccggagctgctccctgccggttcacgaccg
tctcctcttgtcccggagtgctcggattttccttcttgcagctttgcgcctaaacctcca
gtctttacctcgtcctggggcccagtgcactcgcagtcctccgtggtgtaccatccctat
acccatccgccacacttaagcacagactcgaggtatgtgcggtcgtggttggagcctatc
tctggaacagtctctttcccaggctacccggctaacagcagacactacgggctgaagcca
gacgctatccccgaacgcagacccggagattgcatcgccgccaacggacgcggctatccg
gattactattatggttcttcacctgatctccgggataaaacgcagcagatcatcccttcg
ccagaggcggaggctttggtttcgggcaagctcaaagaagacaagccggagtttgatcca
aataacccagtggcgaattggatccatgcgcgctccaccaggaagaagcggtgtccttat
accaaatatcaaacacttgaactcgagaaagagtttttgttcaatatgtaccttacaagg
gaccgtcgatacgaggtcgcccgggtcctaaatctcaccgagcgacaggtcaaaatttgg
ttccagaatcgacggatgaagatgaagaaaatgaacaaggagaagaccgagagtaatgaa
cagtag
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