Clupea harengus (Atlantic herring): 105907743
Help
Entry
105907743 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105907743
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105907743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
Fib_alpha
zf-RING_6
Exonuc_VII_L
Mt_ATP-synt_D
Dermcidin
Y1_Tnp
DDE_Tnp_IS240
Motif
Other DBs
NCBI-GeneID:
105907743
NCBI-ProteinID:
XP_031426905
UniProt:
A0A6P8FTY8
LinkDB
All DBs
Position
7:complement(28432683..28438668)
Genome browser
AA seq
551 aa
AA seq
DB search
MAEAAPSNQDLFTCPVCLDILNYPVTIVCGHTYCMGCITSCWDREDQKGVYSCPQCRQTF
TPRPVLNKNSIFAELVEQIKKTRIQDAAPVACTAGLGDVECDVCTGTKLKAVKSCLECLV
SYCETHYKVHNKLFPGRKHKVTDATGQLQDRICSHHEKVFEIFCRTDQSCICYLCTMDEH
KGHDTVTAAAERTDKQRQVGQTQRRFQQRIQEREKELQELRKAVETLKSSAQTAVEDSER
IFTEMIRSIERRCSEVKELIRDQEKAEVSQAEGLLNRLEQEIAELKRRDAELEQLSHTED
HIHFLKTFQSVSETPESKDLSCISVNQGLSFEAVKKSVSSLKMQLENFCKEEVMKISASV
TEVQAILPPEPTTREDFLQYFCHFTLDPNTAKRNLHLSEGNRRVEERAKIQSYPDHPERF
DEWEQVLCREGVSGRCYWEVERSGDVYISVSYKSISRRGRGYECGFGANDQSWSLSLSSS
SSSFFHNNKQTKLPLVRSSRIGVYVDHRAGTLAFYSISDTMTLLHRVQTTFTHTLYPGLR
CLSSRSSMKLL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggctccaagtaaccaggacctttttacatgcccggtttgccttgatatt
ctgaattatccggtaactattgtctgtggacacacttactgtatgggctgcattacgagc
tgctgggatcgggaagatcagaagggagtctacagctgcccccagtgcagacagacgttc
accccaagacccgttttaaacaaaaatagtatttttgctgagctggtggaacagatcaag
aagaccagaatccaagatgctgctcctgttgcatgtacggctggacttggagatgtggag
tgtgacgtctgcactgggacaaaactcaaagcggtgaagtcctgtctggaatgtctggtg
tcatactgtgaaactcactacaaagttcacaataaactttttcctggacgaaaacacaag
gtgactgatgccacaggccagctacaggacaggatctgctctcatcatgagaaggttttt
gaaatattttgtcgaaccgatcagagttgtatctgctatctgtgcacgatggacgaacat
aaaggccatgacacagtcactgctgcagcagaacggacagacaaacagaggcaggtgggg
caaacccagaggagattccagcagagaatccaggagagagagaaggagctgcaggagctg
aggaaggctgtggagactctcaagagctctgcacagacagcagtggaggacagtgagagg
atcttcactgagatgattcgctccattgagagaaggtgctctgaggtgaaagagctgatc
agagatcaggagaaggctgaggtgagtcaggctgaaggactcctgaatcgactggagcag
gagattgctgagctgaagaggagagatgctgagctggagcagctttcacacacagaggat
cacatccatttcctcaagacctttcagtcagtcagtgagacacctgagtctaaagactta
tcctgcatctctgtgaaccaaggcctctcttttgaggctgtgaagaaatctgtctcctca
ctaaagatgcagctggagaatttctgcaaggaggaagtcatgaaaatatctgcatcagtg
actgaagtccaggctattttgcctcctgaacctacaaccagagaggatttcctacaatac
ttctgtcacttcacactggatccaaacacagcaaaaagaaacctccatctgtctgagggg
aacaggagggtggaagagagagctaagatccagtcatatcctgatcatccagagagattt
gatgagtgggagcaggtgctgtgtagagagggtgtgtctggacgctgctactgggaggtt
gagcggagtggggatgtttatatatcagtctcatataaaagcatcagcaggagaggaagg
ggttatgagtgtgggtttggagctaatgatcagtcctggagtctgagcctctccagcagc
agctcctctttctttcacaataataaacagactaaactccctctagttcgcagctccaga
ataggagtgtatgtggatcacagggcaggaactctggccttctacagcatctctgacaca
atgaccctcctgcacagagtccagaccacattcactcacacactctaccctgggttaagg
tgtttgagttctagatcatcaatgaagctgctgtga
DBGET
integrated database retrieval system
