Clupea harengus (Atlantic herring): 105908052
Help
Entry
105908052 CDS
T09045
Symbol
ppp1r9ala
Name
(RefSeq) neurabin-1 isoform X1
KO
K17551
neurabin
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105908052 (ppp1r9ala)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105908052 (ppp1r9ala)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105908052 (ppp1r9ala)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105908052 (ppp1r9ala)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ_5
PDZ
SAM_2
SAM_1
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
105908052
NCBI-ProteinID:
XP_031415249
Ensembl:
ENSCHAG00000026617
UniProt:
A0A6P8ET42
LinkDB
All DBs
Position
2:27202415..27225910
Genome browser
AA seq
1450 aa
AA seq
DB search
MIKAESKGERSLRSASPHRNAYKSDFHAIKCTFDGSKSDGTPKSYANGSSDSREDTRGRP
FGNRVNKIKNIFLQMDGQQQDIQETNKSLLKSDASPVVSPTKYASSTQKTSTSTTPTPTS
PESLSLDKIPKGEETEIDKVALAEKFSVTRKLFEKCVKEPSAEKSSPGKAFGRLSQGSVS
DEVKGSRKSTGSAESNASSGKTEHSPTLLAKTPTDERKDGEEAKQAHRLSLNAGPISRRL
ENFMADSDSEESVRASSKSTESAVKIRSPLQCSTPISSARDHSNKPTSPVADGINKPTSP
IADACQKATSPVANVSCKPSSSVTGGSNKAVSARSSSSEPTSPSGQSSYKRSSSTGEGIT
KPSIGSDGVKASSPPPREQRLPQAHVGSLYNSNRTKTDTTKNEGHVVRSPSTEKSPDQAP
ALDPAGAGMVRAELVVVQNESSESDENEEVCLEDEVFTECKVQKELKAAGPTETQGEAPT
DLPSPKETEVTKGSEVGSRTPEIQHGGREELREVTETARHTGNHREEEEEEGEEGERSEH
EEPAEEDKSLVKSSPVVFGIENAAFVDDKDVEQHEEEDEDEEQEEEEPCEQYEEAPGLSD
EEDPNPRRKVFFSTESIKVFNTYSNEEYDRRNDEVDPVAASAEYELEKRVEKMDVFAVEM
EKGDNGLGISIIGMGVGADQGLEKLGIFVKTITEGGAAEADGRIQVNDQIVEVDGISLVG
VTQLFAATVLKNTKGSVRFLIGREKPGTQSEVARLISETLEQERNQQQELDDPYEQSTEE
DEHYEDEDGEDEDGVLGSSFGGRSTVEVFDLPENETMFLPTNMDAAQLSFKFKELQIKHS
IAAVELTQIKEKLRDMEEEKGSWESREADLQESIDENSEKIQKLEKFWLESQALCKTVNE
QLTETQSQYEGLDKKYNKAKKLLKDYQQKEIDFVKREEELKRTLDEREAWYKAQLEILQE
RLAALESNAFSSEGSASQHSALGERPWSGQEAGGPVENTHSSDSLLPDADWSEVVPETER
LDTSAHRAKGQLAQKAKRQPPSRSKLRETFGASPCPPEEDEEDESLSPEVPRLRRRSIQE
SLSLPVPICGPSGNGQKEEGAEEVATARGTADLSGSPSPPGNQRASMESGDSGSLSPPKD
TAPSSSPSGFLRNVKKRESKGKGKESREELNDSSSAGKPKRRFPDFGGLRKSGGKGKRHD
KESVRVSLDSRGSAELLEESGGNVSPTDSMSSVPASCMPFSWFGDKDKDRDRDPLSSSSS
LPYSTTETSSEQSQDRKNKTNLSWSSLFSRSLDLSLSVLDDSNAGSPSSDLTGLVAEPNL
SGRSHTLTFSSNETLDDEPFPVGKDYQWQNRPVPEWTVQQVCVWLMGMNLDQYTAEFTAK
GVDGQQLMNLDSDRLKVLGVASQSDRATIKKKLKDMKKAQEKVEKQREKREKEARRSGKL
PAANTTDSIC
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggcagaaagcaaaggagagaggagcctgcgaagtgcttccccccacagaaat
gcctacaaatcagacttccatgcaattaaatgcacatttgatggctcgaagtccgacggc
acccctaaatcatatgcaaatggatccagcgactcccgggaggacacgagggggaggccc
tttggtaacagagttaacaaaattaagaacatttttcttcagatggatggtcagcaacaa
gatatccaggaaacaaataaaagtcttttgaaaagtgacgcatccccagtcgtctcccca
acaaaatatgccagcagcacacagaaaaccagcacaagcaccacccccacccccactagt
ccggaatctctaagtttggacaaaattcccaaaggtgaagaaacggagatcgataaagtg
gctttagcggagaaattctcggtgacgaggaaactttttgaaaaatgcgtcaaagagcca
tcggctgaaaagtcatccccaggcaaagcgtttggccgactgtcccagggaagcgtttct
gatgaagtcaaaggtagcaggaaatcaacaggctctgctgagagtaatgccagcagtggc
aaaactgaacacagtccaactttgcttgcaaaaaccccaacagatgagagaaaagatggg
gaagaggcaaaacaggcacacaggctgtcattaaatgctggccctatatccaggagactt
gagaacttcatggctgatagtgacagtgaggaatctgtgagagcatctagtaaaagcaca
gagagcgcagtgaaaatacgaagcccacttcaatgttcaacccccatttcatctgcaagg
gaccactccaacaaacctacttctccagttgctgatggcattaacaaacctacttcccca
attgctgatgcatgtcaaaaagcaacatctcctgttgccaacgtgtcatgcaagccctcg
tcttcagttactggagggtccaacaaagcagtctcagccagaagcagctcaagtgagcct
acatcccccagcggccaaagctcttacaagcgctcatcatcaacaggtgagggcattact
aaaccatctataggcagtgatggagtcaaggcatccagcccacccccacgggaacagagg
ctcccccaggcacatgtgggtagcttgtacaactctaatcggaccaagaccgacaccaca
aagaatgaggggcatgtggtacgaagtccttccacggaaaagtcgcctgaccaggcccca
gcactggacccagctggggctgggatggtccgtgctgaactcgtggtggtccagaatgag
tcgtcagagagcgacgagaacgaggaggtgtgcttggaggacgaggtgtttacagagtgc
aaagtgcagaaagagcttaaagctgcaggacccacagaaactcagggtgaagctccaaca
gacctgccctctccaaaggagacagaggtcaccaaagggtctgaggtgggaagcagaaca
ccagagatccaacatggagggagagaggagttaagagaggtgactgagactgctaggcac
actggtaatcaccgtgaggaggaggaagaagagggggaggagggggagagaagtgagcat
gaggaaccagcggaagaggataagagcctggttaagagctcacctgttgtgtttggcatt
gagaatgcagcttttgtggacgataaggatgtggagcagcacgaggaagaggatgaggac
gaagagcaggaggaggaggagccatgtgagcagtacgaggaagcccccggtctctctgat
gaagaggacccgaatcctcggaggaaagttttcttctctactgagtcaataaaggtgttc
aacacctactccaacgaggagtatgaccggcgcaacgacgaggtggaccccgtggcagcc
tcggctgagtacgagctggagaagcgagtggagaagatggacgtgttcgcggtggagatg
gagaaaggtgacaatggcctgggcatcagcatcattggaatgggagtgggggcggatcaa
ggtctggaaaagcttggaatttttgtgaagaccataacagaaggaggagcagctgaggcg
gacgggcggatccaggtgaatgaccagatcgtggaggtggacggcatcagcctggtgggg
gtcacacagctcttcgctgccaccgtcctgaagaacactaagggcagcgtcaggttcctg
attgggcgagagaagccgggcacgcagagcgaggtggcccggctgatcagcgagaccctg
gagcaggagaggaaccagcagcaggagctggacgatccctacgagcagtccaccgaggag
gacgagcactacgaggacgaggacggggaggacgaggacggagtcctggggtctagcttc
ggtgggcggagcacagtggaggtgtttgacctgccggaaaatgagaccatgttcctgccc
accaacatggacgccgcacaactgagcttcaagttcaaagagctgcagataaagcatagc
attgcagcagttgaactaacccaaataaaagaaaagctgcgagacatggaggaggagaag
gggtcatgggagtccagggaggccgaccttcaggagagcatcgacgagaacagcgagaag
atccagaagctggagaagttctggctggagtcccaagccctctgcaagacagtgaacgag
cagctcacggagacccagagccagtacgagggcctggacaagaagtacaacaaggccaag
aagctgctgaaagactaccagcagaaagagatcgactttgtgaagcgggaggaggaacta
aagcgaacgctggatgagagagaggcttggtacaaagcccagctggagatcctgcaggag
cggttagcagcgttggagtcgaacgctttctcatctgagggctccgcttcccagcactcg
gcactgggggagaggccgtggagcggccaggaggccggggggcctgtggagaacacacac
tcctcagactcactgctgccggatgccgactggtccgaggtggtgcctgaaacggagcgt
ctggacaccagtgctcaccgtgccaagggccagctggcccagaaagccaagaggcagcct
ccatcacgcagcaaactgagagagacgtttggggcctcgccgtgcccgccagaggaggac
gaggaggacgagtccctgagtcccgaggtaccccgcctgaggcggcgctccatccaggag
agcctctctctgccggtgcccatctgcggcccgtctgggaacgggcagaaggaggagggc
gccgaggaggttgccactgccaggggcacggccgatctgtcaggctccccgtctccaccg
ggcaaccagcgggccagcatggagagcggagacagcgggagtctgtcccctcccaaagac
acggccccctccagctcgccctcgggattcctgaggaacgtcaagaagagggagtccaag
ggcaagggcaaagagagcagagaggagttaaacgacagctcatcagcagggaaaccaaaa
agacgatttcctgactttggaggcctgcggaagtctgggggaaaagggaagaggcatgac
aaagaatccgtgagagtgtcattggacagcaggggttcagcagagttgctggaggagtcc
gggggcaacgtgtccccgacggactccatgtcctccgtccctgcctcctgcatgcccttc
tcctggttcggtgataaggacaaggaccgggacagggacccgttgtcgtccagcagcagc
ctgccctactccaccacagagaccagcagcgagcagagccaggatcgcaagaacaagaca
aatctctcctggtcttctttattcagtcgctccttagatttgagtttatctgttttagac
gattcaaacgctgggagtcccagttcagacttgacagggttagttgctgagcccaatctc
tctgggcgttcgcacactctaaccttctcttccaatgagacactagacgacgagcctttc
cctgtggggaaggactatcagtggcagaaccgccccgtgccagagtggactgtccagcag
gtctgcgtctggctcatgggcatgaacttggaccagtacacggcggagttcaccgccaag
ggtgtggacggccagcagctcatgaacctggacagcgacaggctcaaggtcctgggtgtt
gcgagccagagcgaccgtgccaccatcaagaagaagctgaaggacatgaagaaggcccag
gagaaggtggagaagcagcgggagaagcgagagaaggaggcgcgccgcagcgggaagctg
ccagccgccaacaccacggactccatctgctga
DBGET
integrated database retrieval system