Clupea harengus (Atlantic herring): 105908863
Help
Entry
105908863 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105908863
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105908863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_3
zf-RING_2
zf-RING_6
U-box
zf-RING_5
zf-Nse
zf-RING_10
Exonuc_VII_L
TMPIT
Y1_Tnp
Prok-RING_4
Fib_alpha
DUF4239
Tli4_N
Motif
Other DBs
NCBI-GeneID:
105908863
NCBI-ProteinID:
XP_042564288
UniProt:
A0A8M1KPG8
LinkDB
All DBs
Position
7:complement(30406556..30415704)
Genome browser
AA seq
588 aa
AA seq
DB search
MAEAILKKEEDSFTCPVCLDLLKDPVSIPCGHNFCMRCIEGCWDQRGVYSCPLCKDTFTP
RPKIKKNALIAEMVETFMMTRIQASPISPSNAGLGDVECDVCTGRKLKAVKSCLECLVSY
CETHYKAHNELIPGRKHKVIDATGQLQDRICSHHKKVFEIFCRTDQSCICYLCTMDKHKG
HDTVTAAAEWTDKQRQLGQTQRRFQQRIQEREKELQELRKAVKTLKSSAQTAVEDSERIF
TEMIRSIERRRSEVKELIRAQEKVEVSRAEGLLKRLEQEIAELKRRDAELEELSHTEDHI
HFLKNFPSIRDSPHSKDFPNMTFNQSFSFEAMKESVCAVKVQLEEKLDDIFRQEVVRISA
AVTNIQIIQSLEYADPELPVRRSNSKENLPSNMSEVQAVFPEPATREEFSQYSCHFTLDP
NTAHRNLHLSEGNRRVERRDEVQSYPDHPERFDEMYQVLCRERVSGRCYWEVEWSRWVYI
SVSYKSISRKGRGNECGFGYNDQSWSLITSSSSSSFWHNNKETKLPLVASSRIGVYVDHR
AGTLAFYSVSDTMTLVHRVQTTFTHTLYPGFGFGFGIAYVFGSSVKLL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggctattttaaagaaagaagaggactccttcacatgtccagtctgtctagat
ctgctgaaggatccagtgtctattccctgtggacataatttctgcatgaggtgcattgag
ggctgctgggatcagagaggagtctacagctgccccctgtgcaaagacaccttcactccc
agacctaaaataaaaaaaaatgctctgattgctgaaatggtggagacatttatgatgacc
agaatccaagcttctcctatttctccctctaatgccggacttggagatgtggagtgtgac
gtctgcactgggagaaaactcaaagctgtgaagtcctgtctggaatgtctggtgtcatac
tgtgaaactcactacaaagctcacaatgaacttattcctggacgaaaacacaaggtgatt
gatgccacaggccagctacaggacaggatctgctctcatcataagaaggtttttgaaata
ttttgtcgaaccgatcagagttgtatctgctatctgtgcacgatggacaaacataaaggc
catgacacagtcactgctgcagcagaatggacagacaaacagaggcagttggggcagacc
cagaggagattccagcagagaatccaggagagagagaaggagctgcaggagctgaggaag
gctgtgaagactctcaagagctctgcacagacagcagtggaggacagtgagaggatcttt
actgagatgatccgctccattgagagaaggcgctctgaggtcaaagagctgatcagagct
caggagaaggttgaggtgagtcgggctgaaggactcctgaagcgactggagcaggagatt
gctgagctgaagaggagagatgctgagctggaagagctttcacacacagaggatcacatc
catttcctcaagaatttcccgtcaatcagagactctcctcactctaaagactttcccaac
atgaccttcaaccaaagcttctcttttgaggctatgaaggaatctgtctgtgcagtgaag
gtgcagctggaggagaaactggatgacatcttcaggcaggaagtagtcaggatatctgca
gcagtgacgaatatccagatcatccagtctttagaatatgctgatcctgagctcccagtc
agaagatcaaacagtaaggagaatctgccatcaaacatgtcagaagtccaggctgttttt
cctgaaccagcgaccagagaggagttctcacagtactcctgtcacttcacactggatcca
aacacagcacacagaaacctccatctgtctgaggggaacaggagggtggaaaggagagat
gaggtgcagtcatatcctgatcatccggagagatttgatgagatgtatcaggtgctgtgt
agagagagagtgtctggacgatgctactgggaggttgagtggagtaggtgggtttatata
tcagtctcatataaaagcatcagcaggaaaggaaggggtaatgagtgtgggtttggatat
aatgatcagtcctggagtctgatcacctccagcagcagctcctctttctggcacaataat
aaagagactaaactccctctagtggccagctccagaataggagtgtatgtggatcacagg
gcaggaactctggccttctacagcgtctctgacacaatgaccctcgtgcacagagtccag
accacattcactcacactctctaccctgggtttgggtttgggtttgggattgcgtatgtg
tttggttcatcagtgaagctgttgtga
DBGET
integrated database retrieval system
