Clupea harengus (Atlantic herring): 105909191
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Entry
105909191 CDS
T09045
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121 isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105909191 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105909191 (pom121)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105909191 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
105909191
NCBI-ProteinID:
XP_012693256
Ensembl:
ENSCHAG00000012924
UniProt:
A0A6P3W9T0
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All DBs
Position
8:9994537..10001929
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AA seq
1197 aa
AA seq
DB search
MRSRDDKDATGALIAQLNTAMSPKVKWRLAITAIVLCVIVILYLILTRIPTYIYVFVIGA
CGVGCYYNPIYFPFLSRLGLNPRRGLTIPAAFLNWLPGWSISRESSGRRRNRTLPPSNNT
ELTNERLSETSLHYPDPSFNCTFYPRHTYMDRAESNPSRFYGTPRLSSLKKRLSYGVSME
STPSMVSPGRHYPLHQASTTSLGILPQPWDRFHQKSILKPRNSALVQSPVRIAKPDSHPN
ISAFFDNLNTQPAPESLQRQPEPCSRESVLSVLRESRKREVDKDDKRENTDGQYGKRSRH
DSGRSTNSGLEPLLANGAPSLQVPKTGQKRWLNGVLAEESATKRSRTSSVSSAAGGPSTA
GARNSIVSSYSSSRAASKRKANSSSSQSPSTSLGSPGPQTPVRAAKKLRDDTINSPSLSF
GKSDRSDSDLTPAAKESKPTPETPRSVATANSKEPGSLRRRKIPLVAHSKDGQLPLPPPP
ELGYTITVEDLDRERKATLSQIQKLLEEPEPEKPAPEPAPATTAPSTSLFQPPTTTTAAA
AAVDAAAAAAATTTSENTPAVSAPSLSSITTSAPTFTLPSAAPDISSALGLTPAAAAPAG
LAPASSLLGLSAASLPTSAASQPNSLLESLKAMRAPMFGGATTAASTLPTTAAVTPAMMT
PAAQSVGTVKSEPSAAVPPAAVLLSSGAPRPVPNMNSAFAQVLAQPLQPPSSGAGLFGLV
KPTATLAPTPSLACSSSSAQTAAVASSGIGTFGTTTTATLLTSGFKPIFGATTTAPASAQ
EGKPAVPSFTNIFGSTNSSSVFGQTVATATVSTPATGGSTGLFGGLTASQPAPAPASTGA
STATSTPAKSLFGNWGAATAATATAPATNTFQFGASTTTTTGGVATAAPASTTSSSSTNS
FQFGAVQQPAPPAASTQPPAPQGGFTFGQPSGGQSSTPAAFGGFGMGGANPAATSTDTTT
PAATAPVFGASSFSGASQASAAKPFSFGGTAALAAGAPAGNTASPFSFGGAASSAAAPSA
TAAPAFGTAGPSLFGGGGGSSRPGFSFGGAPATTTTATTSGPMAPPSFGTPSTQTAAPLA
AANPSFAFGAAPQNATASPATNSNAGGFNFGTPSQAPSFSFGANTPNFLATSTPFNQPAP
GGAIPFGSPQAPQAQGFSPQTASPFGAAPMGSFSIGAGSKPSARQRLQARRMHVRKK
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atgagatctcgagacgacaaagatgcgacgggcgcactgatcgcgcagctaaataccgcc
atgtctccgaaagtaaagtggcggctagcgatcacggctattgtactttgtgtgattgta
atattgtacctcattttgactcgtattccaacgtatatatacgtttttgtcattggtgct
tgtggcgttggttgctactacaacccgatatattttccttttctctctagattaggcctt
aatccacgccgtggtttgacaattccagcggcttttcttaactggttaccggggtggagc
attagtagagaatcgtcaggcaggcgaagaaacagaactcttccaccctcgaataatact
gaattaaccaacgaaaggctctctgaaacttcactgcattatccggacccttctttcaac
tgtacgttttacccgcgacatacgtacatggatcgagctgaatccaatccgtcgagattt
tatggaacacctcgtttatcttccctgaaaaagaggctgtcatatggggtttctatggag
agcacaccgtccatggtctccccaggacgacattaccctctccatcaggcgagcacaaca
tccttggggattctaccacaaccatgggatcgcttccaccagaagagtattctcaagccg
cgaaactctgctttagtccaaagccctgtcaggatagcgaaaccagacagccacccaaac
atatctgctttctttgataatttgaacacccaaccggcgccagaaagcctgcaaagacag
cctgagccgtgctctcgagagagtgtattgagcgtcctgagagaaagccgcaaacgagag
gtggacaaggacgacaaaagagagaacactgacggacagtatggaaaaagaagtcgccat
gacagtggtaggagcaccaattcaggacttgagcccctgctggccaacggagcaccatcc
ctccaagtaccaaaaactggtcagaagagatggctgaatggtgtgctggcagaggagtct
gcaaccaagagatctcgtacgtcctccgtcagctctgcggctgggggtcccagcactgcg
ggagcccgcaactccatcgtcagctcctacagctcctcccgggcagcctcaaagcgcaag
gccaattccagttccagtcagtccccttcaacaagcctgggctcccccggcccacagaca
ccagtgagggcagccaaaaagctcagggatgataccatcaactcgccaagcttgtctttt
ggaaagtctgacaggtcggactcggatttgactccggccgcaaaggagagcaaacctacc
cctgaaactcccaggtctgtggccactgccaactcaaaggaacccgggtccctacgcaga
cgcaagattcccctggtggctcacagcaaagatggacagttacctctgcctcctccacct
gagcttggctataccatcacagttgaggatttggacagagagcggaaggccacactttct
cagattcaaaagctcctggaagaacctgaaccagaaaagcctgcacctgaacctgctcct
gcaaccacagcgccctccacctccctgttccaaccccctaccaccaccactgccgccgcc
gctgctgttgatgctgctgctgccgccgccgccaccaccaccagtgagaacactccagct
gtctctgctccttcactgagctccatcacaacctccgctcccaccttcaccctgccctcg
gcagctccagacatatcctctgccctcggtcttacccctgccgctgctgctcctgccggc
ctggcccctgcctcctccttgttggggctctctgcagcctcccttcccacctctgccgca
agccagcccaactctttgctggagagcctgaaggccatgagggcacctatgtttggagga
gccaccaccgcagcttccaccctgcccacaacagctgctgtgacaccagctatgatgacg
cccgctgctcagagcgtgggcaccgtgaagtctgagcccagtgcggcagtccctccggcc
gccgtcctactgtcctccggtgcaccacgcccggtgcccaacatgaactcggcattcgcc
caggtcctggctcagcccctgcagccgccctccagtggagccggcctgtttggtctggtg
aagccgacagcaacccttgcccccacaccatcactggcctgctcctcatcctcagcccag
acggcggcagttgcctcatctggtatcggcacatttggcaccaccacgacagccacgctg
ctgacctctggcttcaagcctatctttggagctaccacgacggccccggcatctgctcaa
gaaggcaaaccggctgtccccagcttcacaaacatctttggcagcacgaacagcagcagt
gtttttggccaaacagtggccacggcaacagtatccactccagcaacaggtggaagcacc
ggtctgtttggagggctcactgccagccagccagcaccagcaccagcctccaccggtgcg
agtaccgcaacctccacacctgccaagtctctgtttggtaactggggcgcagctactgcg
gcaacagccactgcgcctgccaccaacacattccagtttggagcctccaccaccactacc
actggtggtgtagcaacagctgcacctgcctccaccaccagctcctccagcacgaacagt
ttccagtttggcgcggtccaacaaccggcacccccggctgcctccacccagcccccggca
cctcagggtggcttcacgttcggccagccgtcagggggtcaaagctccacgccggctgcc
ttcggagggtttggcatgggaggcgcgaaccccgcagccacctccaccgacaccaccaca
ccggcagccacagcgcctgtgtttggggcgtcctccttcagcggcgcctcacaggcatct
gctgccaagcccttctcgttcgggggtacggcagcactggcagcaggggcgccagccggc
aacacagcgtctccattttcatttggaggtgcggcgagttctgccgctgcgccctctgcc
acggcggcacctgcttttggcacggcggggccgtcactgtttggcggaggtggtgggagc
tcaaggcctggtttctcatttgggggtgcacccgctaccacgaccaccgccaccacctct
ggccccatggcccccccctccttcgggacgccctccactcagactgcagccccccttgcg
gcggcaaacccctccttcgcatttggcgcagcgccccaaaatgccacggcaagccccgcc
actaattcaaatgcaggcggctttaacttcggcacgccgtctcaggcaccctcattctca
ttcggagccaatacaccaaactttctggcaacgtccacaccgtttaatcagcctgctcct
ggaggcgctatcccctttggttccccccaggcaccccaagcacagggcttcagccctcag
acagcttctcctttcggcgccgctcccatgggaagcttctccatcggcgctggctccaaa
ccctctgctcgccagagactgcaggctcgcaggatgcatgtcaggaagaagtga
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