Clupea harengus (Atlantic herring): 105909384
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Entry
105909384 CDS
T09045
Symbol
sigmar1
Name
(RefSeq) sigma non-opioid intracellular receptor 1
KO
K20719
sigma non-opioid intracellular receptor
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105909384 (sigmar1)
Transporters [BR:
char02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
105909384 (sigmar1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERG2_Sigma1R
SLATT_1
Motif
Other DBs
NCBI-GeneID:
105909384
NCBI-ProteinID:
XP_012693462
Ensembl:
ENSCHAG00000005904
UniProt:
A0A6P3WA56
LinkDB
All DBs
Position
12:28336649..28340806
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AA seq
270 aa
AA seq
DB search
MLVGISFWTVLANHGGLDEKRSLKQSQVVQCFMLKLFVISCLFFESSTMSLTNKFLKLVV
ASGVLFLAVQYLRYWMVNKQYVFTKEDIANLAKQYAGQDHEQAFAKVVVELRKRYPGHIL
EDEDLQWVFVNAGGWMGSMCLLHASLTEYVLLFGTAVDTGGHSGRYWAEISDTIISGTFR
QWKEGTTKSEMYYPGDTIVHVPGEATSVQWSAGTWMVEYGRGFIPSTLGFALADTIFSTQ
DFVTLFYTVRVYAKGMLLEAHTLLTEAGIF
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgctagtcggaattagcttttggacagtattagcaaaccatgggggactggatgaaaag
cgcagtctgaaacagagccaggtggtccagtgttttatgttaaagttgtttgttatttca
tgcctattttttgagagctcaacaatgtctttgactaacaaatttttaaaactcgtcgtg
gcaagtggagttttatttttggctgtacagtacctgcgatattggatggtaaacaaacag
tatgtgtttaccaaggaagacatagctaacttggctaaacagtatgcgggtcaggaccat
gaacaggccttcgccaaggtggtggtggagctgcgtaagcggtaccccggccacatcctg
gaggacgaggacctgcagtgggtgtttgtgaacgccgggggctggatgggctccatgtgt
ctcctccacgcctcgctcacggagtacgtcctgctcttcgggacggccgtggacaccggg
ggacactcgggccggtattgggcagaaatatcagacaccatcatctcggggacatttagg
caatggaaggaagggaccacaaaaagtgagatgtattaccctggcgatacaattgtgcac
gtgcccggggaggcgacgtcggtgcagtggagcgcggggacgtggatggtggagtacggc
cgaggcttcatcccctccacgctgggtttcgctctggccgacaccatcttcagcactcag
gactttgtgacgctcttctacaccgtgagggtgtacgccaaggggatgctcctggaggcc
cacacccttctcaccgaggctgggatcttctga
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