Clupea harengus (Atlantic herring): 105911515
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Entry
105911515 CDS
T09045
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105911515 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105911515 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
char04091
]
105911515 (lman1)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
105911515 (lman1)
Lectins [BR:
char04091
]
L-type lectins
105911515 (lman1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Lectin_legB
V-SNARE
GCN5L1
KxDL
Motif
Other DBs
NCBI-GeneID:
105911515
NCBI-ProteinID:
XP_031433848
Ensembl:
ENSCHAG00000022472
UniProt:
A0A6P8G1I3
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Position
12:2109210..2120507
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AA seq
510 aa
AA seq
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MAVSIVKCLTADVYLLILSVLLRPIYAEIIAGSSTGGDTPHRRFEYKYSFKGPHLSQSDG
SVPFWVHTGNAIPSSDQIRITPSLRSQKGSVWTKNTVKFQHWEAEVTFRVAGRGRMGADG
LAMWFTESQGLTGPVYGGADQWNGVGIFFDSFDNDGKKNNPAILVIGNNGNLVYDHQNDG
STQALGTCLRDFRNKPYPVRAKITYYQKTLTIMINNGFTPDKDDYEFCARVENMVIPAEG
FFGLSAATGGLADDHDVLSFLLFRLTEPGQELPEAEQEIPKEEKDKYQEEFLNFQQDLDK
KKEEFQKEHTDVQGQPFEEQYESVNDREIRQVFEGQNRIHLEIKQLNRQLAMILDEQRRY
VSVITDEVSKRGAQTQSGQVPSQEIDTILSTQREVLNGLNDMKTSLTASLKQVDSGAQPV
QHGGALSSYETIQHFNEIKEHLHVVKRNVDHIIQKQPGPSEKVQKCPELPAMPSCLSPTH
FVVFVVIQSILFFGYIMYRSQQEAAAKKFF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccatagtaaagtgcctcactgctgatgtgtatttattaatattatctgta
ttgttacgtcctatttatgccgaaattattgctggcagttcaacgggtggagacacgccg
catcgacggtttgaatacaagtatagcttcaaaggaccgcacttgtctcaaagcgacggc
agcgtacccttttgggtccatactggaaatgctattcccagctcagaccagatccgtatc
actccatcactgcggagccagaagggttcggtgtggaccaaaaacactgtcaagttccag
cattgggaggctgaggtcaccttccgcgtggctggtcgtgggaggatgggagcggacggt
ctggcgatgtggttcacagaaagccagggcttgacagggcctgtgtatggcggagcggac
cagtggaacggagttggtatcttctttgactccttcgacaacgatggaaagaaaaataac
cctgccatcctcgtcattggcaacaatggaaaccttgtttacgaccatcagaatgatgga
tcaactcaggccttgggcacatgcttaagggacttccgaaacaaaccctatccagtccgt
gccaaaatcacctactaccagaagacattaacgatcatgatcaataatggtttcacccca
gataaggacgactatgagttctgtgctcgtgtggagaacatggtcatcccagcggagggc
ttctttggcctctcagcagctactggaggtttagcagatgaccatgatgtcctgtccttc
cttctgttccgtctaacagagcctggccaggaactgcctgaagctgaacaagaaattcct
aaagaggagaaggacaaataccaggaggagtttctgaatttccaacaagacctggacaag
aagaaggaggagttccagaaggagcacacagatgttcagggccaaccctttgaggagcag
tatgagagtgtgaatgaccgtgagatccggcaggtgtttgagggtcagaaccgcattcac
ctggagatcaagcaactgaaccggcagctagccatgatcctggacgagcagagacgctac
gtgtccgtcatcaccgatgaggtgtccaaacgtggagcgcagacccagtccggccaggtt
cccagtcaagaaatagacaccatcctttcaacacaacgtgaagttctgaatggcctgaac
gatatgaagacctctctgaccgcctctctgaagcaggtggactccggagcccagccggtc
cagcatggcggggcgctgagcagctacgagaccatccagcacttcaacgagatcaaggaa
cacctgcacgtggtcaagagaaacgttgatcacatcatccagaaacagccaggtccgagt
gagaaggtccagaagtgtccagagctgcccgctatgccctcctgtctgtctcccactcat
tttgtggtgtttgtggtcatccagtccatcctgttctttggatacatcatgtacaggagt
caacaagaggcagctgccaagaaattcttttga
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