Clupea harengus (Atlantic herring): 105912229
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Entry
105912229 CDS
T09045
Symbol
tarbp2
Name
(RefSeq) RISC-loading complex subunit tarbp2 isoform X1
KO
K18420
RISC-loading complex subunit TARBP2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105912229 (tarbp2)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Gene silencing
microRNA pathway
RISC loading complex
105912229 (tarbp2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
DND1_DSRM
Staufen_C
Motif
Other DBs
NCBI-GeneID:
105912229
NCBI-ProteinID:
XP_031423419
Ensembl:
ENSCHAG00000021309
UniProt:
A0A6P8FD61
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Position
5:7963157..7969085
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AA seq
340 aa
AA seq
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MNDDKSPGNCKRNSGSSSIEQMLAVNPGKTPISLLQEYGTRIGKTPVYDLLKAEGQAHQP
NFTFRVSVGDISCTGQGPSKKAAKHKAAEASLKMLKGSIGVVGGVEGFAGVEMSIDGECI
QAEMKSTSSTQQVECNPVGALQELVVQKGWRLPEYTVTQESGPAHRKEFTMTCRVERFVE
IGSGTSKKLAKRNAAAKMLSRIHDVPVDLRSSHEAETEEDTFTMQHRLEGGKWKGSGCTW
DSLRNSAGEKILQLRSHPLATVSSTANFCSLLHDLSEEQRFDVSYLDLEERSLSGLCQCL
VELSTQPITVCHGFAPSQDAARANAAHNALQYLKIMAGGK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacgataaaagcccgggcaactgcaagagaaactctgggagttccagtattgag
caaatgctggctgtgaatcccgggaagacgcccatcagtctgctgcaggagtatggaacg
cggataggcaagaccccggtgtatgacctgctgaaggccgagggccaggcccaccagccc
aacttcaccttccgcgtctccgtgggcgacataagttgcaccggccaagggcccagtaag
aaggctgcaaagcacaaagccgcagaggcttctctcaagatgctcaaaggaagcataggg
gttgtcggaggagtcgagggatttgctggggtcgaaatgtctatagatggggaatgtatt
caagcagagatgaagtcaaccagctctacccagcaagtcgagtgcaatccagtaggagca
ctacaggagcttgtagtgcagaaaggctggcgtttgcctgagtacacagtgacacaggag
tctgggcctgcacatcgtaaggagttcaccatgacctgccgcgtggagagattcgttgaa
atcggcagtggtacctccaagaagcttgccaagcgtaatgcagcagcgaagatgctctcc
aggatccatgacgtaccggtggatctgcgcagcagccatgaagccgagacggaggaagat
accttcactatgcagcaccggttggagggtgggaagtggaagggctccggctgcacctgg
gactctcttcgcaactcggcgggcgagaagatcctgcagctgcgcagccacccgctggcc
actgtcagctccacagccaacttctgctccctgctgcacgacctgtctgaggagcagcgc
ttcgacgtcagctacctcgacctggaggagcgcagtctcagtggcctgtgtcagtgtctg
gtggaactctccacgcagcccataaccgtgtgccacggcttcgcccccagccaggatgcc
gcacgggctaatgctgcccacaatgcattgcagtacctcaaaatcatggcaggtggaaaa
tga
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