Clupea harengus (Atlantic herring): 105912582
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Entry
105912582 CDS
T09045
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105912582
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105912582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
zf-RING_2
zf-RING_5
Fib_alpha
U-box
DUF4239
DUF4407
zf-Nse
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
105912582
NCBI-ProteinID:
XP_031426897
UniProt:
A0A6P8FUT1
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Position
7:complement(28610509..28619839)
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AA seq
554 aa
AA seq
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MAEAAPSNHELFTCPICLDLLRDPVTIHCGHSYCIGCINDCWDQEDQKGVYSCPQCRQTF
TPRPVLSKNNIFAELVEQIKKTRIQAAAPVPCRAGPGDVECDVCTGTKLKAVKSCLECLV
SYCETHYKAHNELNPGRKHKVTDATGQLQERICTQHKKALAIFCRTDQSCVCLLCLVEEH
KGHDTVSASAGRREKQTHLGQTQSKIQQRIQKKEKELKELRKAVETLKSSAKTAVQDSDK
IFTEMIRSIERRRSEVKELIRAQEKAEVSQAEGLLKRLEQEIAELKRRDAELGQLSHTED
HIHFLKTFQSVSETPESKDLSCISVNQGLFFVAVKKSVTSLKRQLDNICKKEIMKISASV
TKVPAVLSPELKTREDFLQYSCHFTLDPNTANINHHLSEGNRMVERRAEVQSYPDHPERF
HGWSQVLCREGVSGRCYWEVEWSGGWVDIAVSYKSISRKGEASECEFGCNDQSWSLDLSS
FGSSFYHNNKQTKLRLVASSRIGVYVDHRAGTLAFYSVSDTMTLLHRVQTTFTHPLYPGF
GFGFYYAGASVKLL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggctccaagtaaccacgaactttttacatgtccgatttgtttggatctt
cttagggatccagtgactattcattgtggacacagttactgtattggctgcattaacgac
tgttgggatcaggaagatcagaagggagtctacagctgcccccagtgcagacagacgttc
accccaagacccgttttaagcaaaaataatatttttgctgagctggtggaacagatcaag
aagaccaggatccaagctgctgctcctgttccatgtagggctggacctggagatgtggag
tgtgacgtctgcactgggacaaaactcaaagctgttaagtcctgtctggaatgtctggtg
tcatactgtgaaactcactacaaagctcacaatgaacttaatcctggacgaaaacacaag
gtgactgatgccacaggccagctacaggagaggatctgcacccaacataagaaggctcta
gcaatattttgtcgtacggaccaaagttgtgtttgtttgctctgtctggtggaggaacac
aaaggccatgacactgtgtcagcttctgcagggaggagagagaaacagacacacttgggg
cagacccagagtaaaatccagcagagaatccagaagaaagagaaggagctgaaggaactg
aggaaggctgtggagactctcaagagctctgcaaagacagcagtgcaggacagtgataag
atctttactgagatgatccgctccattgagagaaggcgctctgaggtgaaagagctgatc
agagctcaggagaaggctgaggtgagtcaggctgaaggactcctgaaacgactggagcag
gagattgctgagctgaagaggagagatgctgagctggggcagctttcacacacagaggat
cacatccatttcctcaagactttccagtcagtcagtgagacacctgagtctaaagactta
tcctgcatctctgtgaaccaaggcctcttttttgtggctgtgaagaaatctgtcacctca
ctaaagaggcagctggataatatctgcaagaaggaaatcatgaagatatctgcatcagtg
actaaagtcccggctgttttgagtcctgaacttaaaaccagagaggatttcctacaatac
tcctgtcacttcacactggatccaaacacagcaaacataaaccaccatctgtccgagggg
aacaggatggtggaaaggagagctgaggtccagtcatatcctgatcatccagagagattt
catgggtggagtcaggtgctgtgtagagagggtgtgtctggacgctgctactgggaggtt
gagtggagtggggggtgggtagatatagcagtctcatataaaagcatcagcaggaaagga
gaggctagtgagtgtgagtttggatgtaatgatcagtcctggagtctggacctctccagc
tttggctcctctttctatcacaataataaacagactaaactccgtctggtggccagctcc
agaataggagtgtatgtggatcacagggcaggaactctggccttctacagcgtctctgac
acaatgaccctcctgcacagagtccagaccacattcactcacccactctaccctgggttt
gggtttggtttttattatgctggagcatcagtgaagctgttgtga
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